Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0152 ATGTTATTTTACCATGAGGTTAATTATAATGCAGAATCCGAGCAAGGGGTTGCACAGGCGATTCTTCGAGGTCTCATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCAGAGAGTGCCAAAAGTCTTGTTAGGCAAATGTTAGAACCAGATCCCAAGCTTCGACTAACAGCCAAGCAGGTGCTTGAGCATCCTTGGCTTCAAAATGCTAAGAAGGCTCCTAACGTTCCCCTTGGTGATGTAGTCAAGTCTAGGCTTAAGCAGTTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTGAGGGTCATTGCTGATTTCTTATCCACTGAAGAAGTTGAAGACATCAAAGAAATGTTCAAGAAGATGGACAGTGACAATGATGGCATCGTTTCTGTTGAAGACCTAAAAGCTGGATCTCAAAATTTTGGATCTCAACTTGCTGAGTCTGAAGTTCAGAGTCTGATTGAAGCCGTAAATACTAATGAGAAGGGAACACTGGACTACGGAGAATTTGTTGCTGTTTCCCTGCATTTAAAACGGATGGCTAATGATGAGCATCTTCGCAAAGCCTTCTCCTATTTCGACAAAGATGGGAATGGGTATATTGAACCAGATGAGCTGCGGGATGCCTTGACAGAAGACGGTGCAGATGATTGTACAGATGTAGCAAATGATATTTTCCAGGAAGTAGACACAGACAAGGATGGCCGTATCAGCTATGATGAATTTGTGGCGATGATGAAAACCGGAACAGATTGGAGGAAAGCCTCTAGGCATTATTCACGAGGGAGATTCAACAGCTTGAGCTTGAAGTTGATGAAAGATGGTTCTGTAAACTTAGGGACTGAGTAATGTTTGCCTATTGACCTGGTGCCGTGCAAGTCAGGGAAGGAGCTGCATGATCCTACATACAAGCCCTTGTTGCTTCCATTAAAACAAGCTGCCTTGGAGCAATTGGTGTGTGACATGTATGATTCCTGTCTTTTAACCTCTCTCACCCATCTGTTCTAG 1011 0.4322 MLFYHEVNYNAESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSTEEVEDIKEMFKKMDSDNDGIVSVEDLKAGSQNFGSQLAESEVQSLIEAVNTNEKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELRDALTEDGADDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSVNLGTEXCLPIDLVPCKSGKELHDPTYKPLLLPLKQAALEQLVCDMYDSCLLTSLTHLF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0152 336 ProSiteProfiles EF-hand calcium-binding domain profile. 182 217 IPR002048 GO:0005509
Lele41g0152 336 SUPERFAMILY Protein kinase-like (PK-like) 3 93 IPR011009 -
Lele41g0152 336 SMART efh_1 186 214 IPR002048 GO:0005509
Lele41g0152 336 SMART efh_1 114 142 IPR002048 GO:0005509
Lele41g0152 336 SMART efh_1 222 250 IPR002048 GO:0005509
Lele41g0152 336 SMART efh_1 150 178 IPR002048 GO:0005509
Lele41g0152 336 ProSitePatterns EF-hand calcium-binding domain. 231 243 IPR018247 -
Lele41g0152 336 Gene3D Transferase(Phosphotransferase) domain 1 5 68 - -
Lele41g0152 336 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 243 - -
Lele41g0152 336 ProSitePatterns EF-hand calcium-binding domain. 195 207 IPR018247 -
Lele41g0152 336 ProSiteProfiles EF-hand calcium-binding domain profile. 218 253 IPR002048 GO:0005509
Lele41g0152 336 CDD EFh 186 248 IPR002048 GO:0005509
Lele41g0152 336 FunFam Calcium-dependent protein kinase 7 76 251 - -
Lele41g0152 336 Pfam Protein kinase domain 12 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0152 336 ProSitePatterns EF-hand calcium-binding domain. 123 135 IPR018247 -
Lele41g0152 336 Gene3D - 74 251 - -
Lele41g0152 336 FunFam Calcium-dependent protein kinase 7 12 74 - -
Lele41g0152 336 ProSiteProfiles EF-hand calcium-binding domain profile. 110 145 IPR002048 GO:0005509
Lele41g0152 336 Pfam EF-hand domain pair 113 173 IPR002048 GO:0005509
Lele41g0152 336 Pfam EF-hand domain pair 185 248 IPR002048 GO:0005509
Lele41g0152 336 SUPERFAMILY EF-hand 96 274 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0152 Lele-ChrLele41 1170555 1172365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0152 11 280 EF-hand Containing Proteins AT1G74740 67.778 5.36e-130 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele41g0152 EF-hand_7 9e-16 CL0220