Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0139 ATGAAAAACGGCAAGGGGAAGGGAGCAGTTGATGATCGAATGGCTGGCAAGCGAAAGGCTGCTCTAAAGCCTGACAAGAGCAGTGCAAAAATGACCAAGAAGGCGAGGAATGCCAAGAAAGATCCCAACAAACCAAAAAGACCGCCCAGTGCTTTTTTTGTCTTCCTGTTGGAGTTCAGAAAGACCTTTAAGGCAGCAAATCCTCATGTGAAGGCTGTATCAGCTGTGGGGAAAGCTGGAGGACAGAAATGGAAATCTATGACTCCTGCTGAGAAAGCTCCGTATGAAGCCAAGGCTGCAACAAAGAAAGCCGAGTATGAAAAACTCATGAATGCATATAATAAAAAGCCGACAAACTCGGTCAATGACAGAGATGAGGAATCGGATAAGTCCAAGTCTGAAGTGAATGATGAAGAGGATGAAGCCAGTGGAGAGGAAGCACACCAAGAAGAGGAGGACGAAGAGGAGAATGACGAAGACGAGGATGACGAAGATGATGACTGA 504 0.4623 MKNGKGKGAVDDRMAGKRKAALKPDKSSAKMTKKARNAKKDPNKPKRPPSAFFVFLLEFRKTFKAANPHVKAVSAVGKAGGQKWKSMTPAEKAPYEAKAATKKAEYEKLMNAYNKKPTNSVNDRDEESDKSKSEVNDEEDEASGEEAHQEEEDEEENDEDEDDEDDD 167
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0139 167 MobiDBLite consensus disorder prediction 75 167 - -
Lele41g0139 167 MobiDBLite consensus disorder prediction 138 167 - -
Lele41g0139 167 Gene3D High mobility group box domain 28 130 IPR036910 -
Lele41g0139 167 CDD HMGB-UBF_HMG-box 45 110 - -
Lele41g0139 167 SMART hmgende2 44 115 IPR009071 -
Lele41g0139 167 MobiDBLite consensus disorder prediction 96 110 - -
Lele41g0139 167 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Lele41g0139 167 MobiDBLite consensus disorder prediction 119 137 - -
Lele41g0139 167 MobiDBLite consensus disorder prediction 1 46 - -
Lele41g0139 167 MobiDBLite consensus disorder prediction 1 49 - -
Lele41g0139 167 SUPERFAMILY HMG-box 31 117 IPR036910 -
Lele41g0139 167 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Lele41g0139 167 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 152 IPR031061 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele41g0139 Lele-ChrLele41 1062888 1064513 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lele41g0139 HMG_box 1.1e-22 CL0114