Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0130 ATGAATCACTATTGTGCAAACTACAAGATTCTAGCATTACAAGTTCTCAGTGGATTGGTTCTTTTGTACACGAGTTCAACATTTAGCTCAGCAACAGAGATCCCACAAGGAAACGAAATTGATTTTCAAGCTTTACTTGGCTTCAAGAGTCGGATATCTCGAGATCCATTCAAAATATTGAGTTCCTGGAACAACTCCATCCATCACTGCAAATGGGTAGGAATCACCTGCAACATTTCCACTGGACGGGTGGTGCAACTGAGCCTTGGACAACAGAGATTGGCTGGCACCGTTTCACCTTCAATAGGAAACCTCACATTCCTCAGAGTACTTAATCTAAGCATCAACAGCTTCCATGGTGAATTTCCTAATGAAGTGGGACGTCTGTTATACCTTCAAACTCTAGACATCACCCTTAATTACTTCACTGGAGGTATAACAAGTAATCTGAGTTACTGTAAGGAACTGAGGATTGTATTGGCAGGTCATAACAATTTAGCAGGAAACATCCCAACATGGATAGGGAATTTATCTTCTTTATCTAAAATTGGGCTTGGAGTGAACAACTTCCATGGAAGCATACCAAAAGAGATGGGCTATTTATCAGGCTTGACATCTCTTGAACTAAATGGTAATTACCTATCTGGCACAGTTCCTCCTTCTATTTACAACATTTCCTCCATATACTACATCCATGTTTCTCAAAACAAACTGCAGGGTAGTATACCACCTGATGTTGGCTTAAGTCTTCCTAACCTCGAGACATTTGGCGGGGCAGTCAACAATTTCACTGGAACTATTCCACTATCATTGTTAAATGCTTCTAGTCTACGACTTATTGATTTTGCTGAAAATGCTCTAACTGGAACACTGCCTAAGAACATAGGAGTGTTGAAAAGTTTATTTTGGCTCAACTTTGATGACAATAGGCTTGTATCTGATGGAAAAGATTATGATGGTCTACGTCCTCAAATAACTTCTCTGGTTAATTGCACTGAACTTGAAGTTTTGGGTCTTGGAGGAAATATGTTTGGAGGAGAATTGCCCAACTTAATAACTAATTTATCAAGCAGATTAAGAAAATTAATATTTGGTGATAATAAATTACATGGAAGCATTCCTGTTGCAATTGGAAATCTTGCTAGTTTGGAAACTCTAGGATTGGAAGGAAACCTTCTAGCTGGTAGTGTCCCTGATGGAATAGGTAAACTCCAAAATTTGGGTCGTTTGGATTTGAATGGCAACAGATTTTCAGGAACAATCCCTTGGTCTCTAGGAAACTTAACTTCATTAACACTGCTCTTCATGGAGGATAATAACTTTGAAGGAAGCATACCTTCAAGCCTCGGAAATTGTCAGAAGCTTCTGGTACTGAGTCTTTATAACAACAAGCTCAGAGGCACCATACCAAAACAAGTGATTGGCATTTCTTCACTTTCAGTGTACTTGGACGTCTCTAATAATATTCTCACAGGACCTATACCAGATGATGTGGGAAATTTACATAGTCTAACAAAGTTAGTACTCTCAGACAACAACTTTTCTGGTGTCATTCCATCTTCTCTTGGAAAATGTGTCAGCTTGGAGCGGTTGGACTTGCAGGGTAATTTATTCAAAGGAGAGGTTCCTCAAAGTTTGGAGGGATTGAGAGGCTTAGAAGATATAGATCTTTCACGTAACAACTTGTCTGGGAAGATTCCTGAATTCCTCGGTGAGTTAGATCTCATGCACCTCAATCTTTCTTACAATAACTTTGAGGGTGAAGTACCAAAGGCCGGGATCTTTAATAATGCAATTTCGACTTCAATTTATGGAAACAGCAAGCTCTGCGGTGGCATCCCAGAATTTAACTTATCTGCTTGTACAACCCGAAAGGCTTCGTCGTCTAGAAAATCTCTTGCCCTCAAGGTGTTTATCCCTTTTGCTAGCACTCTGGCTTTTGTAATCCTTTTTTCATGCTTTATTGCGTGCTTTTGCATGGCAAGAAGGACAAGAAAGAGATCAGAAGCAAGTGCAATCACTACAAGGGAATGGAACGCAGAAATTTCTTACTCAGAGCTAGCAAGATGCACTGGTGGTTTCTCCCTAGATAACTTGATCGGTTCGGGAAGTTTTGGTTCGGTATACAAAGGAACTCTTGGAGGTGACGGAGCATTAGTCGCAGTGAAAGTATTAAATCTTCAACAAAGAGGAGCTTCAAGGAGTTTCATTGACGAATGCAAAGCTTTAAGAGGAATAAGGCATCGGAACCTTCTCAAGATCATAACTGCCGTATCAAGCATTGATCACCAAGGTAATGACTTCAAAGCTTTGGTGTTTGAGTTCATGTCCAATGGAAATCTAGATGACTGGATACATACGAATACAAGAGATAATGTGCAAGGGAAGAGCAAGAGATTGACATTCATCCAAAGACTGAACATAGCAATTGATGTTGCATGTGCACTGGAATATCTGCACAACTTTTGCCAAACACCTATCATGCATTGTGATGTAAAGCCGAGCAATGTACTCCTTGATGATGATTTGGTAGCCCATGTGGGTGACTTCGGACTAGCAACCCTTCTATACGAGGAATCAAGAGAGTCTTCCACATCCAAACAACACTCAACAATGTCAGGTTGCCTAAAGGGTTCAATTGGGTATATTCCACCAGAGTATGGTATGGGTGGGCAACCTTCAACACTGGGAGATATCTACAGCTATGGAATACTATTACTGGAGATTTTCACAGGAAAAAGACCCACAAATGAGGAATTTGAAGGAGGGATGGGAATTCACCAGTATGTTGAAATGGCTTTGCCCAATCATGCCATGGAGATAGTTGATCCTTTTCTGCTACCTGAAGAAGAAGATGAAGATGAAGAGATATATTCGGAGAAAGCTATAAGGAAGGGAAACCGAAGACGGAGAGTAATGGAGGATTGCTTAAGTTCGTTGATGCAAGTGGGAGTGTCTTGCTCTGCAAATGGGCCATCGGAGAGGCTGCTGTCTATGACTGTGGTCGTTAACAAACTCCAAGCAATCAAGGAATTGTACATCTCCAAATAA 3051 0.4061 MNHYCANYKILALQVLSGLVLLYTSSTFSSATEIPQGNEIDFQALLGFKSRISRDPFKILSSWNNSIHHCKWVGITCNISTGRVVQLSLGQQRLAGTVSPSIGNLTFLRVLNLSINSFHGEFPNEVGRLLYLQTLDITLNYFTGGITSNLSYCKELRIVLAGHNNLAGNIPTWIGNLSSLSKIGLGVNNFHGSIPKEMGYLSGLTSLELNGNYLSGTVPPSIYNISSIYYIHVSQNKLQGSIPPDVGLSLPNLETFGGAVNNFTGTIPLSLLNASSLRLIDFAENALTGTLPKNIGVLKSLFWLNFDDNRLVSDGKDYDGLRPQITSLVNCTELEVLGLGGNMFGGELPNLITNLSSRLRKLIFGDNKLHGSIPVAIGNLASLETLGLEGNLLAGSVPDGIGKLQNLGRLDLNGNRFSGTIPWSLGNLTSLTLLFMEDNNFEGSIPSSLGNCQKLLVLSLYNNKLRGTIPKQVIGISSLSVYLDVSNNILTGPIPDDVGNLHSLTKLVLSDNNFSGVIPSSLGKCVSLERLDLQGNLFKGEVPQSLEGLRGLEDIDLSRNNLSGKIPEFLGELDLMHLNLSYNNFEGEVPKAGIFNNAISTSIYGNSKLCGGIPEFNLSACTTRKASSSRKSLALKVFIPFASTLAFVILFSCFIACFCMARRTRKRSEASAITTREWNAEISYSELARCTGGFSLDNLIGSGSFGSVYKGTLGGDGALVAVKVLNLQQRGASRSFIDECKALRGIRHRNLLKIITAVSSIDHQGNDFKALVFEFMSNGNLDDWIHTNTRDNVQGKSKRLTFIQRLNIAIDVACALEYLHNFCQTPIMHCDVKPSNVLLDDDLVAHVGDFGLATLLYEESRESSTSKQHSTMSGCLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLLEIFTGKRPTNEEFEGGMGIHQYVEMALPNHAMEIVDPFLLPEEEDEDEEIYSEKAIRKGNRRRRVMEDCLSSLMQVGVSCSANGPSERLLSMTVVVNKLQAIKELYISK 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0130 1016 SMART serkin_6 694 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0130 1016 Pfam Leucine rich repeat 482 537 IPR001611 GO:0005515
Lele41g0130 1016 PANTHER RECEPTOR-LIKE PROTEIN 55 323 1009 - -
Lele41g0130 1016 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 196 289 - -
Lele41g0130 1016 SMART LRR_typ_2 380 404 IPR003591 -
Lele41g0130 1016 SMART LRR_typ_2 201 225 IPR003591 -
Lele41g0130 1016 SMART LRR_typ_2 501 525 IPR003591 -
Lele41g0130 1016 SMART LRR_typ_2 105 129 IPR003591 -
Lele41g0130 1016 SMART LRR_typ_2 549 573 IPR003591 -
Lele41g0130 1016 SMART LRR_typ_2 428 452 IPR003591 -
Lele41g0130 1016 SUPERFAMILY L domain-like 39 312 - -
Lele41g0130 1016 SUPERFAMILY Protein kinase-like (PK-like) 673 1006 IPR011009 -
Lele41g0130 1016 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 38 195 - -
Lele41g0130 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 776 1016 - -
Lele41g0130 1016 SUPERFAMILY L domain-like 357 611 - -
Lele41g0130 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 323 627 - -
Lele41g0130 1016 ProSiteProfiles Protein kinase domain profile. 694 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0130 1016 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Lele41g0130 1016 Gene3D Ribonuclease Inhibitor 153 246 IPR032675 -
Lele41g0130 1016 Gene3D Ribonuclease Inhibitor 247 315 IPR032675 -
Lele41g0130 1016 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Lele41g0130 1016 Gene3D Transferase(Phosphotransferase) domain 1 776 1014 - -
Lele41g0130 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 664 775 - -
Lele41g0130 1016 Gene3D Ribonuclease Inhibitor 316 629 IPR032675 -
Lele41g0130 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Lele41g0130 1016 Gene3D Ribonuclease Inhibitor 40 152 IPR032675 -
Lele41g0130 1016 Pfam Protein kinase domain 696 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0130 1016 Gene3D Phosphorylase Kinase; domain 1 675 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0130 Lele-ChrLele41 989767 992934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0130 38 1014 Receptor kinase-like Gene Family AT3G47570 44.708 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele41g0130 Pkinase 4.7e-37 CL0016