Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0110 ATGGCTTCTGCATATCACTGTCCAGTAGCATTCACTGGAACTTCAGCTTCTGATCTTCTCCGAAGTTCTGCTAATGGTGTTAGTGGTGTCCCTTTGAGAACTTTAGGAAGGGCCAGACTAGCTGCTATGGACTTGAATGCCTCACCCGTTCCAGAGGAAGATGAGGACCCATTTGAGGGCCATGTAGAATACTTTGCTGCACAAGAAGAACGCGTAGAAACTGCAGTTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAAAGACGTTTGAAAAGAGAACGTCCAGATGACAGGGCTGTTTATGTATCACCTTCACCTGGTTATGATCAGCTATTTCAAACGAAGTCCCTTAAATCACAAGATAGAAGTAGGCTTCCTCCAGGGTGGTTGGATTGCCCTTCATTTGGTCTGGAAATTTTTTGCATGATACCTTCTAAGGTTCCGCTTGGTGAATCTTTCAATGATTGTGTTGCTCCTGGTAAAAGATACTCATTCAAACAAGTGATACATCAACAAAGAGTTTTAGGGAGAAAACTTGGTTTGGTGATTGATTTGACAAATACTTCTCGGTATTATTCAGTGTCAGGTCTAAAGAAAGAGGGTATCAAGCATGTAAAGATACAATGCAAGGGGCGTTATTCGGTACCTGATAACTTATCTGTGAATCAATTCGTCCATGAGGTTACACAATTTCTATCACGTCAAAAACACTCAAAGAAATATATACTTGTCCATTGTACACATGGACATAATCGTACTGGATACATGATCATTCATTATCTTATGCGCGCAATGCCAATGTCTGTCACACAGGGAATAAAAACATTTTCTGATGCACGCCCTCCTGGAATCTACAAACCTGATTACATTGATGCCTTATACACATTTTATCATGAAAAAAGGCCTGACGTGGTGGCTTGTCCTCCCACTCCAGAGTGGAAGAGATCTTCTGAATTTGATCTTAATGGTGAAGCAGTACCGGATGATGATGACGACGGAATGCCAGGCCCTCCTTTGGATGAGAACCATGAGAAAGATGTGTTGATGACAAATGATGATGTTCTGGGAAATGAGATACCTAATGATCAGCAAGATTCATTCCGGCAGTTCTGTTATAAATCACTTAAATTGGGTGCTGGGGCTAGAGGACATTCACAATTTCCCGGGTCACACCCAGTTTCTCTGAACAGGGAAAGTTTGCAGTTATTACGGCAGCGTTATTATTATGCAACATGGAAAGCTGATGGAACACGATATATGATGCTGATAACGATGGATGGGTGTTACTTAATTGATAGAAGTTTCAATTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGGGCACAAATGATGTGTTGGCCGAGAAGACCCACCATTACACATTACTTGATGGGGAGATGATTATTGATACTGTGCCTGATTCAAAGAAGCAGGAGAGGAGATACCTTATATATGATCTAATAGCCATCAACCAAGTATCAGTAATAGAGCGACCTTTTTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATTGGGAGCGACATAATATATACCAGAGCAGAAACCCTTACTATAGATATGACATGGAACCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCTACAGTCACAAAGCTCTTGTCAGAATTCATTCCAAAACTCTCTCATGCTGCTGACGGCCTCATATTTCAGGGATGGGATGATCCTTATGTACCACGCACTCATGAGGGCCTCTTGAAGTGGAAATATCCTGAGATGAATTCAGTTGATTTCCTCTTTGAGATTGATGATGATGGTGAGAAACTTTTTCTTTATGAACGGGGAAAGAAGAAGCTCATGGAAGGGAATAGGGTAGCATTCAAAGATGGTTCAGATCCCTCATTTTATTCTGGAAAGATCATAGAGTGTTCTTGGGGTTCTGATAACCATGAATGGGAATTCATGCGAGTGAGAACTGATAAATCAACTCCCAATGAGTTCAATACTTTCAAGAAGGTGATGCGAAGCATAAAAGACAATATTACAGAAGATGTTTTGTTGAATGAGATATCTGAGATTATTCGCCTTCCCATGTATGCCGACAGGATAAGAATTGACAGTAAAGCACACCATCATACTAACGCAGCACGGAGAAGTTTTCACTTTTCGGCGCCTGGAGCTACAGAGTTCCTTGGGCCATTGAGTGTAGAAATGAGCTCCAGACGGAAAGAGTCGCCATGA 2241 0.4168 MASAYHCPVAFTGTSASDLLRSSANGVSGVPLRTLGRARLAAMDLNASPVPEEDEDPFEGHVEYFAAQEERVETAVDIARREREERKRRLKRERPDDRAVYVSPSPGYDQLFQTKSLKSQDRSRLPPGWLDCPSFGLEIFCMIPSKVPLGESFNDCVAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYSVSGLKKEGIKHVKIQCKGRYSVPDNLSVNQFVHEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAMPMSVTQGIKTFSDARPPGIYKPDYIDALYTFYHEKRPDVVACPPTPEWKRSSEFDLNGEAVPDDDDDGMPGPPLDENHEKDVLMTNDDVLGNEIPNDQQDSFRQFCYKSLKLGAGARGHSQFPGSHPVSLNRESLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGTNDVLAEKTHHYTLLDGEMIIDTVPDSKKQERRYLIYDLIAINQVSVIERPFYERWKMLEKEVIEPRNWERHNIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLSEFIPKLSHAADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEIDDDGEKLFLYERGKKKLMEGNRVAFKDGSDPSFYSGKIIECSWGSDNHEWEFMRVRTDKSTPNEFNTFKKVMRSIKDNITEDVLLNEISEIIRLPMYADRIRIDSKAHHHTNAARRSFHFSAPGATEFLGPLSVEMSSRRKESP 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0110 746 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 351 590 - -
Lele41g0110 746 Gene3D - 590 681 IPR012340 -
Lele41g0110 746 PIRSF mRNA_capping_HCE 111 721 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lele41g0110 746 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 222 291 IPR000387 GO:0016311|GO:0016791
Lele41g0110 746 FunFam mRNA capping enzyme family protein 121 335 - -
Lele41g0110 746 SUPERFAMILY Nucleic acid-binding proteins 592 703 IPR012340 -
Lele41g0110 746 Gene3D Protein tyrosine phosphatase superfamily 104 320 IPR029021 -
Lele41g0110 746 CDD RNA_5'-triphosphatase 128 294 - -
Lele41g0110 746 CDD Adenylation_mRNA_capping 382 590 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lele41g0110 746 Pfam Dual specificity phosphatase, catalytic domain 177 297 IPR000340 GO:0008138|GO:0016311
Lele41g0110 746 Pfam mRNA capping enzyme, catalytic domain 391 589 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lele41g0110 746 PANTHER MRNA-CAPPING ENZYME 120 701 - -
Lele41g0110 746 ProSitePatterns Tyrosine specific protein phosphatases active site. 244 254 IPR016130 GO:0016311|GO:0016791
Lele41g0110 746 Gene3D DNA ligase/mRNA capping enzyme 350 589 - -
Lele41g0110 746 Pfam mRNA capping enzyme, C-terminal domain 594 687 IPR013846 -
Lele41g0110 746 FunFam mRNA capping enzyme family protein 588 696 - -
Lele41g0110 746 MobiDBLite consensus disorder prediction 321 343 - -
Lele41g0110 746 ProSiteProfiles ATP-dependent DNA ligase family profile. 473 617 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Lele41g0110 746 FunFam mRNA capping enzyme, putative 350 587 - -
Lele41g0110 746 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 125 314 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0110 Lele-ChrLele41 815669 827445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0110 40 709 Protein tyrosine phosphatase (PTP) family AT3G09100 69.379 0.0 946