LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele41g0095	ATGGAAGTGGATGAAAAACCCGTTATTGAGCTCGACAAACCAACTGCCGTTGACGTTGGTGGCGGCGGAGACGGCGGTAGTGGCGACGAGGGTTTGACAGCGTTAGGTGAGGGGGATGGGAATAGCTCCCTGGGGGCTAAAGACAGAGTGAAGGGTCCTTGGTCTCCAGAGGAGGACGCGATACTGAGTCGACTTGTTAGCAAGTTCGGGGCCCGAAATTGGAGCTTAATTGCTCGCGGGATCGCTGGAAGATCCGGCAAGTCTTGCCGGCTCCGGTGGTGTAATCAACTCGACCCAGCTGTGAAGCGCAAGCCCTTTACTGTTTTCCTCAATCACAAGCTTGTGATTGTTGTTTTGGTAAAGGACTCTAATGACGGCACTACTCTAGCCATGTGGACTGTTTGGTTTGGGCTTTTCCTAGGGGCTCGATATGAGGAGGATCGGATCATAGTTGCAGCACATGCAATCCATGGGAACAAATGGGCAGCCATAGCCAGACTTCTAGCAGGAAGAACAGATAATGCCATTAAGAATCATTGGAATTCTACTCTGAGGCGTCGGGGAATAGAACTTGATAAAGTTAAATTAGAAGCTTGCAACACGGTGGAAGATGTCAGCTTGGAGAAAGCAAAAGCATCATCAGAAGAAACTCAGTCATGTGGGGATGTTAATTCCTTGAGATCCTCAGAAGGAAGAGATGTCAGTTCTGTGGAGAATATGGAGGATAAATATGAAGACAAAGCACAGATAAAGAGTCAAATGAACCATGAAGTCAAGGATCCACCTACTCTTTTCCGACCTCTAGCACGTATAAGTGCTTTCAGTGTATATAACTCATTGGATGGTTCACAACCCACTACGTCAGCCTCTGGGCCAGTTCCAATGCAAGGACCTCTTTTTCAAGCATCAAAGCCAGGTATTGAAATTTGTAAAATGCTGGATGGAATTTATGGCTGTGACCTATCTGTTCCTAACCACTGTGGCCATGGTTGTTGCACTGATCTGAGTGGTGAAAATGCCAAAAGCTCCTTGTTGGGGCCAGAATTTATTGAATTTTCAGAGCCCCCATCATTCCCAAGTTTTGAGTTGGCTGCCATAGCTACAGACATTAGTAACCTTGCTTGGCTGAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGTGACTCAACCGGCAGGGTGATATCTCAGGGGTCTTAA	1203	0.4697	MEVDEKPVIELDKPTAVDVGGGGDGGSGDEGLTALGEGDGNSSLGAKDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFTVFLNHKLVIVVLVKDSNDGTTLAMWTVWFGLFLGARYEEDRIIVAAHAIHGNKWAAIARLLAGRTDNAIKNHWNSTLRRRGIELDKVKLEACNTVEDVSLEKAKASSEETQSCGDVNSLRSSEGRDVSSVENMEDKYEDKAQIKSQMNHEVKDPPTLFRPLARISAFSVYNSLDGSQPTTSASGPVPMQGPLFQASKPGIEICKMLDGIYGCDLSVPNHCGHGCCTDLSGENAKSSLLGPEFIEFSEPPSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDSTGRVISQGS	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele41g0095	400	SMART	sant	50	99	IPR001005	-
	Lele41g0095	400	SMART	sant	145	186	IPR001005	-
	Lele41g0095	400	ProSiteProfiles	Myb-like domain profile.	145	184	IPR001005	-
	Lele41g0095	400	Gene3D	-	143	187	-	-
	Lele41g0095	400	MobiDBLite	consensus disorder prediction	1	52	-	-
	Lele41g0095	400	MobiDBLite	consensus disorder prediction	216	240	-	-
	Lele41g0095	400	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	145	188	IPR017930	-
	Lele41g0095	400	CDD	SANT	53	95	IPR001005	-
	Lele41g0095	400	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	46	101	IPR017930	-
	Lele41g0095	400	PANTHER	MYB PROTEIN-RELATED	51	234	-	-
	Lele41g0095	400	SUPERFAMILY	Homeodomain-like	48	180	IPR009057	-
	Lele41g0095	400	Coils	Coil	237	257	-	-
	Lele41g0095	400	MobiDBLite	consensus disorder prediction	216	233	-	-
	Lele41g0095	400	CDD	SANT	145	184	IPR001005	-
	Lele41g0095	400	ProSiteProfiles	Myb-like domain profile.	46	97	IPR001005	-
	Lele41g0095	400	Pfam	Myb-like DNA-binding domain	51	97	IPR001005	-
	Lele41g0095	400	Pfam	Myb-like DNA-binding domain	145	183	IPR001005	-
	Lele41g0095	400	Gene3D	-	50	102	-	-
	Lele41g0095	400	FunFam	MYB transcription factor	51	102	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele41g0095	Lele-ChrLele41	747379	750298	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele41g0095	40	400	MYB Transcription Factor Family	AT3G09230	45.553	1.64e-96	292

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lele41g0095		Myb_DNA-binding	2.9e-14	CL0123