Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0080 ATGGCTCAGTCGTCGGGTTGGGGCGGTTTGGTGGGAGACTACATCGTCGGGAAGCAAATTGGGTCAGGGTCTTTCTCGGTGGTGTGGCATGGGAGGCACCGAGTCCATGGAACTGAGGTTGCCATTAAAGAGATCGCCACCGGTCGGCTTAACAAGAAGTTGCAGGAGAGTCTCATGTCTGAGATTTTTATCCTGAAGAAGATTAACCATCCTAATATAATTCGTTTGCACGATATAATTGAGGTTCCTGGGAAAATACATCTGGTGTTAGAGTACTGTAAAGGGGGCGATCTCTCTATGTATATACAGCGCCATGGAAGAGTTCAAGAGGGAACTGCAAAGCATTTTATGCAACAGCTAGCTGCTGGCCTACAAGTTCTTCGAGAAAATAATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTTCTCACCAGAAATGATGACAAGTCAGTTCTGAAGATTGCTGATTTTGGATTTGCAAGATCTCTGCAACCTAGGGGTCTTGCAGAAACCTTGTGTGGTTCACCTCTCTACATGGCTCCAGAAATTATGCAACTACAGAAGTACGACGCTAAGGCAGACCTCTGGAGTGTGGGTGCGATCTTATTTCAGCTTGTTACAGGAAGAACGCCATTTACTGGGAATAATCAAATACAGTTACTACAGAACATTGTGAAGTCAACTGAACTGCAGTTCCCATCCGATAATCAAAGTTTGAGTTCTGAGTGTAAAGATTTATGTCAGAAATTGCTGCGACGTAGTCCAGTGGAACGGCTAACTTTTGAAGAATTTTTTCATCATCCATTTCTTTTTCAGAAGCAACCAGAACAGGATAAATCATTGAGACATGGAAGTTCTTCGAGGATGGTAGGTGAAATTCGCTTAACAGAGGCCAATCCACTGAGAAGGGCCAAGGAAAATCATCAAGAGGACTGCTTACCTTTCTTTTTGGATGATGATTCTTGTGTTCCAGAGTTACCATCTTTTTCGAGGAAGAAATCCTCAATAAAGTCTACCTATGGATTTGACCTTAATACACAGCAAGATAGAGCAGGCTCAGTATTTGCTACTTCTAATAACATAAATTTTACTGCCCGACAGCAACCTGAAAACAGTGCTATAAGGTTGGACAGCCATAGAACCTCAGTAAGAAATCTCGCTGATTCTCTAGAATCTATAGAACAGAGATTAGCAAACACTGGGTCAAGAGACTCACTGGAAAATATTGATCAAGATTATGTTCTCGTGTCTGGACCTCCTATGGATGGATCATCATCTTCAGTGAGTGGATCAAAGCCAAGCCATTTTCCATATAGATCAGGTGCTTCCTTACAGGAGTCTTCTAATGTAATTGATAGAGTAAGTTCTCCAATGCCAATAATTGGAAGTTCAGAAAGTAAGGACTCTGCTCCAGGGACTTCACATGCGTCAATGGATACTGGAGATGAGCAGCCATCGGCTGACTGCATGACCAGGATAAAATCATTGCAACAATGTGCATCCACCATAACTGAATTAGTTCACGAAAAGATGGAGGCTGGGAAGCAGCTGGAAGCATTCTCAATTCAGCTTGTTATTCTTGCTATTTGGAAGCAAGCACTACACATATGCCATGCACAGGCTGCCTCTGCCATGGAAGGAAGTCCAAGTCAAGAAACAACTAGATGGAGGAGGAGCACAAACATGAAGCATGGTAGTTCTGATTCAGAAGAATGCCTTGAAGGAAATGTGCAAGGGCCAAAGGATATTCTATCTCAAATTGAAAGTGAATTTCTAAGGGAATTTGAGCGTGCTGAAGAACTTGCTAAGACTGTTGAGCCGGGAAATACAGAGATGCCAGATGCAATGGAAACAATATTTCAGTCTGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTCATGGGCGAAATGGATAGTGCAGCTGCATTGTATTCAAAAGCTGTGCTACTACTGGTGTTCCTTCTAGTGGAAGCTCCATCCCTCATTCTAAACCCCCCATTTTCACTGACTAACACGGATCGGTACAGGCTTCGCACTTACATCGATTTTCTAAACAACAGGCAAGGCTATTCGAGGTCTTAG 2091 0.4309 MAQSSGWGGLVGDYIVGKQIGSGSFSVVWHGRHRVHGTEVAIKEIATGRLNKKLQESLMSEIFILKKINHPNIIRLHDIIEVPGKIHLVLEYCKGGDLSMYIQRHGRVQEGTAKHFMQQLAAGLQVLRENNLIHRDLKPQNLLLTRNDDKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIVKSTELQFPSDNQSLSSECKDLCQKLLRRSPVERLTFEEFFHHPFLFQKQPEQDKSLRHGSSSRMVGEIRLTEANPLRRAKENHQEDCLPFFLDDDSCVPELPSFSRKKSSIKSTYGFDLNTQQDRAGSVFATSNNINFTARQQPENSAIRLDSHRTSVRNLADSLESIEQRLANTGSRDSLENIDQDYVLVSGPPMDGSSSSVSGSKPSHFPYRSGASLQESSNVIDRVSSPMPIIGSSESKDSAPGTSHASMDTGDEQPSADCMTRIKSLQQCASTITELVHEKMEAGKQLEAFSIQLVILAIWKQALHICHAQAASAMEGSPSQETTRWRRSTNMKHGSSDSEECLEGNVQGPKDILSQIESEFLREFERAEELAKTVEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMDSAAALYSKAVLLLVFLLVEAPSLILNPPFSLTNTDRYRLRTYIDFLNNRQGYSRS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0080 696 Coils Coil 377 397 - -
Lele41g0080 696 CDD STKc_ATG1_ULK_like 20 270 - -
Lele41g0080 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Lele41g0080 696 MobiDBLite consensus disorder prediction 415 444 - -
Lele41g0080 696 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0080 696 FunFam Serine/threonine-protein kinase ATG1 7 312 - -
Lele41g0080 696 FunFam Non-specific serine/threonine protein kinase 2 94 - -
Lele41g0080 696 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 10 624 IPR045269 GO:0004674|GO:0006914
Lele41g0080 696 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0080 696 MobiDBLite consensus disorder prediction 421 444 - -
Lele41g0080 696 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0080 696 MobiDBLite consensus disorder prediction 458 482 - -
Lele41g0080 696 Gene3D Transferase(Phosphotransferase) domain 1 8 316 - -
Lele41g0080 696 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lele41g0080 696 MobiDBLite consensus disorder prediction 458 487 - -
Lele41g0080 696 SUPERFAMILY Protein kinase-like (PK-like) 11 272 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0080 Lele-ChrLele41 582989 592996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0080 10 280 CBL-interacting serine-threonine protein kinases AT2G30360 36.823 5.35e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lele41g0080 Pkinase 5.5e-73 CL0016