Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0070 ATGGACAATCTGTATTTCACTATTTCGACTTTTGTTGGTTCTTGGCTCGGCATTTGCATTATGAATGCTCCTCTGTGGCTCAAGACTTTGACCTGGGAAGACGGATACTATGGTGATTTGAAAACCAATGAGGCTGTGGAAAGTATGTGGACGGAGGTGGCTTCTTCAAGTTCTGAAGAGAATTTTGTTAGACACATGACTGAAATGTCTCATCTGACGTACATATTGGGAGAGGGGGTTGTTGGCAAAATAGCTCTTACCGGGGATCATTGTTGGATTTTATTTGAAGAAATTCTAACTGGTAAATTCCAGACTAAGTTGATTAATGAGTGTCCATATGAATGGCTTCTTCAATTTGCATCAGCTATCAAGGTTGCTGAAGACCTGGCGTTTGTTGCCAATGTCAAGGAGAAATTCAATTTCTTTCATTGTGTAATGGCAAACACTTCGACTTTGAGCTCAGATGAAAATATTCAGGATTGGTCATTCTCAGCTCTAACAGATTGCCCTCCGCATAATTCAGATGTATCATCTGTTACAAATAGTATCCTGACACGTGAACTATTTGGTGGCAATTCACTTAATATAAATGAATTGAGGTCGAATCCAACTGTCCCTTCGATTGTTCCAGTTGAAGGTTCCATGTCCAGGAAAAATAAGACCACCCTAGGATCTGTTGCTAATAGACAAACTTCTGAACCTGAGTCAGAAAATTTCTCTTTTAAGGATACACGCAGTACTAGCTCCACGTTGATATCTGGTGAAAGAGAGCATGGTCATATTATGGGTATACAGTTTTCTGACAAACACAAATCAGAATATCTTTTGGATGCAATTGTTGGCAATTTACGTGGTGCCTCCAATGATTCTTCATCGATGTTGCCAACAGTATTAACTGCTTCAATTCATCCACAAAGTCATTCGAAGGGAAACACTTTGATAGTAAATAATGCCACGGATTCAAGTAGCCATCTTACATCTGCATTTGGGGCCAACATAGATGATTGTACTGATCTTCTTAAATTGGCATCTTTGGATGACAGTTCAAGCATATTGCTTGATGGGACACAGCAAGAATCTGTTCATGTTCATAAACAGCCTAAGAGTGGACCGAAATTCTCTAGTATTGGCAAGAAAAGAGCCCGCGCGGGAAATACACCAAGGCCAAGACCAAGGGACAGACAGTTGATTATGGACCGCATGAAGGAGCTGAGGGAACTTTGTAGCATTGACAACCTCTTAGATCGGGCCATAAAGCACATGCTGTCCTTGACAGAAATAACAAGCCAGGCTGAGAAATTGAAACAATTTGAGCATAAAGAGGTGCCAGAGTTCAAGAGACAGAAAAGCAATGGCAATCATACCGGGAGGAGCTGCGCAATTGACTTTGGCAGTGAACTCCAAGTATGCCCCATAGTTATAGAAGATCTTGAATGCCCAGGTCACATGCTTATAGAGGTGATATGTAGTGAGCATGGACTTTTCTTGGAGATTGCTCAAGTGATTCGACAGTTGGAGCTTACCATACTGAAAGGTGTTTTAGAAAGCAGTTCAAGCACTGCCTGGACTCGTTTCATTGTTGAGGTTCCCAGAGGTTTTCACAGAATGGATGTTCTATGCCCTTTGTTGCATCTTTTGCAGACTGGAAGAAGCCCCGTCTCAAATAGAATTTGA 1674 0.414 MDNLYFTISTFVGSWLGICIMNAPLWLKTLTWEDGYYGDLKTNEAVESMWTEVASSSSEENFVRHMTEMSHLTYILGEGVVGKIALTGDHCWILFEEILTGKFQTKLINECPYEWLLQFASAIKVAEDLAFVANVKEKFNFFHCVMANTSTLSSDENIQDWSFSALTDCPPHNSDVSSVTNSILTRELFGGNSLNINELRSNPTVPSIVPVEGSMSRKNKTTLGSVANRQTSEPESENFSFKDTRSTSSTLISGEREHGHIMGIQFSDKHKSEYLLDAIVGNLRGASNDSSSMLPTVLTASIHPQSHSKGNTLIVNNATDSSSHLTSAFGANIDDCTDLLKLASLDDSSSILLDGTQQESVHVHKQPKSGPKFSSIGKKRARAGNTPRPRPRDRQLIMDRMKELRELCSIDNLLDRAIKHMLSLTEITSQAEKLKQFEHKEVPEFKRQKSNGNHTGRSCAIDFGSELQVCPIVIEDLECPGHMLIEVICSEHGLFLEIAQVIRQLELTILKGVLESSSSTAWTRFIVEVPRGFHRMDVLCPLLHLLQTGRSPVSNRI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0070 557 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 29 210 IPR043561 GO:0003700|GO:0006355
Lele41g0070 557 MobiDBLite consensus disorder prediction 222 247 - -
Lele41g0070 557 MobiDBLite consensus disorder prediction 357 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0070 Lele-ChrLele41 514888 520098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0070 378 547 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 46.023 3.47e-41 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0070 41 514888 520098 Lele41g0070 41 514888 520098 ECH
Lele41g0070 41 514888 520098 Lele43g1289 43 21086883 21091865 hybridization
Lele41g0070 41 514888 520098 Lele44g1283 44 21165083 21170981 hybridization