Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele41g0065 | ATGGAAGAAGGTCAATGTTGGATTTGGACAAAGAGAAAGCACTCATCTTTGAGCTCTTATAATAATAGTCAAATGTTCATCTATGGCGATTCATGGGAAGAACAAGCCTTTGCAGAAGATGAGCGTCTTGGTGGCTGTATTTGGCCTCCAAGATCATACTCTTGCAGCTTTTGCAGCAGAGAGTTCAGGTCAGCCCAAGCTCTTGGTGGCCACATGAATGTTCACAGAAGAGATAGAGCTCGACTAAAGCAACCCCGGCCAAGTCCACACAATAAACAAGATGATCAAACCAGCAGTCTTCTTGATCATCAAAATTCTTTCACATCTTCTTATCTGGCTTATTCCAACGCTAACCCTAATTCTGATAATATTCTTACTTCTGATCAGGCTAAATTAGCCCCTCCATTATCTTTGATTCAAGAGAATTCCCCACCACATGATTCTTGTGTTTCATGGTCAAACTTTGCTCAACAAAGATTATATTCTCGAAAGGATGAGAAGATTATGTCCAAGATAGTAGATACTGGTTGTAATAAGGAAGAAGGAGCTGATACTGTGAGCTACAAGAGGAGAAGAATAACAGATGATTCATCATCAATTCCATTGATCTCCTCAAAATCAATTCCAGTTGTTGATAATATCAACTCTCAGATGTTCGAGTTTATTAGTCCTAGTTCCATTGAAGAGCTAGATCTGGAGCTAAGGCTTGGTCACAGTCCTCCCAAGCTACTTGTGTTGATGGAATTTAATCGTCAAAGCACAAAGAAGTTATCAAAGCAGGTAAGATGGAGCCCGGAAGAATCTGGAGCGAGATCTTATACTTGTGCGTTTTGCAAGAGAGGATTCTCAAATGCCCAAGCCTTAGGAGGTCACATGAACATCCATAGAATAGACAGAGCAAAGCTCATCAAACAATCATCTGAAGAAGAAAACTCGCTTTCTCTTGACATCTCAATCAAGAACCCTAGCACTTGTACTTCTGATGATGATGATGATCAGCCTCCTCCTTATAATAAGCCTTCCAATTCAGAAGAGAAGGTTTTGTTTCCGTGGGATTCTGAAACACTTCCTAGTAATCCCTTTTTTTCTGGGAATAATAATGAGGAGAACATGGAAATAGATCTTGAGCTTCGGTTAGGTCATCAATCCCACGAGGCCTCAACTGTGAGCACCAGAGAGTTTTTCTGA | 1188 | 0.4066 | MEEGQCWIWTKRKHSSLSSYNNSQMFIYGDSWEEQAFAEDERLGGCIWPPRSYSCSFCSREFRSAQALGGHMNVHRRDRARLKQPRPSPHNKQDDQTSSLLDHQNSFTSSYLAYSNANPNSDNILTSDQAKLAPPLSLIQENSPPHDSCVSWSNFAQQRLYSRKDEKIMSKIVDTGCNKEEGADTVSYKRRRITDDSSSIPLISSKSIPVVDNINSQMFEFISPSSIEELDLELRLGHSPPKLLVLMEFNRQSTKKLSKQVRWSPEESGARSYTCAFCKRGFSNAQALGGHMNIHRIDRAKLIKQSSEEENSLSLDISIKNPSTCTSDDDDDQPPPYNKPSNSEEKVLFPWDSETLPSNPFFSGNNNEENMEIDLELRLGHQSHEASTVSTREFF | 395 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele41g0065 | 395 | MobiDBLite | consensus disorder prediction | 313 | 340 | - | - | |
Lele41g0065 | 395 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 53 | 80 | IPR013087 | - | |
Lele41g0065 | 395 | SMART | c2h2final6 | 273 | 295 | IPR013087 | - | |
Lele41g0065 | 395 | SMART | c2h2final6 | 53 | 75 | IPR013087 | - | |
Lele41g0065 | 395 | Pfam | C2H2-type zinc finger | 53 | 77 | - | - | |
Lele41g0065 | 395 | Pfam | C2H2-type zinc finger | 273 | 296 | - | - | |
Lele41g0065 | 395 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 55 | 75 | IPR013087 | - | |
Lele41g0065 | 395 | PANTHER | OS07G0101800 PROTEIN | 260 | 382 | - | - | |
Lele41g0065 | 395 | SUPERFAMILY | beta-beta-alpha zinc fingers | 51 | 295 | IPR036236 | - | |
Lele41g0065 | 395 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 275 | 295 | IPR013087 | - | |
Lele41g0065 | 395 | Gene3D | Classic Zinc Finger | 250 | 331 | - | - | |
Lele41g0065 | 395 | Gene3D | Classic Zinc Finger | 50 | 120 | - | - | |
Lele41g0065 | 395 | MobiDBLite | consensus disorder prediction | 69 | 100 | - | - | |
Lele41g0065 | 395 | MobiDBLite | consensus disorder prediction | 313 | 344 | - | - | |
Lele41g0065 | 395 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 273 | 300 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele41g0065 | Lele-ChrLele41 | 468812 | 474830 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele41g0065 | 263 | 306 | C2H2 Transcription Factor Family | AT5G06070 | 61.364 | 3.22e-11 | 60.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Lele41g0065 | zf-C2H2_6 | 0.002 | CL0361 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele41g0065 | 41 | 468812 | 474830 | Lele41g0065 | 41 | 468812 | 474830 | ECH | |
Lele41g0065 | 41 | 468812 | 474830 | Lele43g1294 | 43 | 21131709 | 21137594 | hybridization | |
Lele41g0065 | 41 | 468812 | 474830 | Lele44g1286 | 44 | 21200000 | 21201642 | hybridization |