Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0053 ATGGAAGAAGCTTTAAGGAGTGCCTGGTCAGATGAAGAGGAGCTTTTGAGAGATATAGCCGAAGACGCAGTTGATGAGAATTACTATACGAGAAAATCAAGTGAAGAGCAAGCCATTATTAATAGGTTCATCTCCAACATCTACTCAGGACCTACCATTTCTGATATTGAGAATGCCTTATCAGTCGCCACATCCCACCAAAGAGACAGTTTCCACCAACTATCACAAGTTTGCATATTGGAAAGAGGTTTGAATTTGAGCAGGAGTGAGAATAAGTATACCCTGAAAATCAAGTGCTATGGCAATGGCGGATTGAGGGATGATGGATACAAGTGGAGGAAGTATGGACAGAAATCTATTAAGAACAGCCCAAATCCTAGGAGCTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAAGTAGAGAGATCCAGTGAAGAGCCAGACACTGTTATTGTCACCTATGAAGGGCTCCATCTCCACTTTGCTTACCCATATTTTTTAATGGGCCAACCACATCATCATCAAGCCCATCCCCCATCGAAGAAATCTAGGCCCATATATTCACAAGCCCAAGTCCATGATGAAGCCCAAGAATGTCAACTAGTTCATATGGGCCAGAAGCCCAGACAAGCGGATATTACCTTACCCTCTACAGAGAACATGGGCCCACAAGGACTGCTTGAAGACATGGTGCCATGGGTGATTCGGAACCCTAGTTTTAGTAATACCTCAAACTTTTGCTGCTCTTCTTCATAA 765 0.4379 MEEALRSAWSDEEELLRDIAEDAVDENYYTRKSSEEQAIINRFISNIYSGPTISDIENALSVATSHQRDSFHQLSQVCILERGLNLSRSENKYTLKIKCYGNGGLRDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSSEEPDTVIVTYEGLHLHFAYPYFLMGQPHHHQAHPPSKKSRPIYSQAQVHDEAQECQLVHMGQKPRQADITLPSTENMGPQGLLEDMVPWVIRNPSFSNTSNFCCSSS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0053 254 Gene3D WRKY domain 97 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0053 254 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 184 IPR044810 GO:0003700
Lele41g0053 254 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0053 254 Pfam WRKY DNA -binding domain 107 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0053 254 SUPERFAMILY WRKY DNA-binding domain 104 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0053 254 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0053 Lele-ChrLele41 392371 399115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0053 36 240 WRKY Transcription Factor Family AT5G43290 44.589 1.65e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele41g0053 WRKY 8.6e-26 CL0274