Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0050 ATGACAATGGATCGGGGTCTTTGGGGTTTTACCGATTCCAGAAGGGAACAACAATTGGGAAATCGATCTGTACCAATTCTGCAGCAGAATCAGGGTTTTGAAAATGCCTTTGATCGCAGAAGGGAATTTCGTTTCCTTCAATCTGATCAATTACCAACCAATATGAATACACCTTCTTCCTCTACCGTCACCAACGAGGAGCATTCTCCAGAAGATTGTGATTTTTCTGATGCTGTTTTGAGTTACATAAATCAGATCCTTATGGAAGAAGACATGGAAGATAAGACGTGCATGCTTCAAGAGTCTTTGGATCTTCAAGCAGCTGAGAAATCATTCTATGAAGCACTGGGTGAGAAGTACCCACCTTCACCTGCACAAAATCATCCAAGTCATAGGATGAATGAAAATGATGGGGGCATGGGGAATAATTTCCCCAGAAATTACAACTATGGTAATTTCAACGGAACTTTCACTCATCAGTCCTTGTCTCAAAATCCTAATAAGTTTCCCTCGCAACTTATCCGAGGTAACGGTATTTCTCGGTCATCTTACAGCTCTACGAGCAGTGTTGTAAGTGGTGTGGAAGGGCCTGTGGATTCTCCAAGTAGTATTCATCAGGTTCCAGATCTGAACTGCGAGAGCCAATCGATATCGCAATTTAACAAAGGCGTCGAGGAGGCTAGTAGGTTTCTCCCAAATGGGAACAAGCTGTTTGCTGATTTAGGTTTGTCTAATTTGTCACCAGAAGAACCACAAAAATCAAGAACTCGTGAAATATCATCAGCCAAGGTGGAGAAAGATGAAGGGGATGATTTTCTCGGCGGGTCGAAGGTAAGAAAGCAGCCACCCAGGGGAGAGGAAGATGATGAAGAAGAAAAGTGTAGCAAGCAAGCAGCTGTTTATACAGAACCAACGCTACGTTCTGTGATGTTCGATCTAGTGCTTCTTCATACTGATGGGGAAGGTAAGAACCATTACACGGCTCGTCGTGAAGCGTTGCAGAACAAGACCATCAAGGCGGTGATGCCAAACGGTGGTCAAGCGAAAGCTTCAAACACCAGTAAGGGGCGTGGGAAGAAACAAAATGGGAGAAAGGCGGTGGTGGATTTGAGAACACTTCTGGTTCTGTGTGCACAAGCTGTTGCAGCAGATGATCATAAGAGTGCACAAGAGTTGCTAAAGCAGATCAGGCAGCACTCGAATCCTTTTGGGGATGGAAATCAAAGGTTTGCACATGTCTTTGCCGATGGACTCGATGCACGCTTGGCCGGCACCGGTAGCCAGATTTATAAAGGACTCATCAGTAAAAAACGGTCAGCCGCTGATGTACTGAAAGCCTATCATCTCTACCTTGCTGCATGCCCTTTTAGGAAGATGTCTAATTTTTTCTCAAATGTCACAATAAGGACAGCTTCCGAGAATTCAGCAAGGGTCCATATTATAGATTTCGGTATTCTTTATGGTTTCCAATGGCCAACTTTCATACAGAGACTGGTAATGAAAACAGGAGGGCAACCGCCGAAAATCCGAATCACCGGAATAGACTTCCCACAACCTGGTTTTAGGCCAGCCGAGAGAATAGAAGAAACAGGAAGACGGTTAGCAGATTATGCAAAAGCTTTCAATGTTCCATTTGAGTATGTTGCCATAGCAAAGAAATGGGAAACCATTACGCTTGAGGAACTCAAGATTGATAGGGACGAGTTCCTGGTTGTGAACTGTTTATACAGAGCAAAGAACTTGTTAGATGAATCTGTGGCAGTGGAGAGTCCAAGGAATGCTTTCCTGAATCTGGTAAGAAAGATCAATCCGGACATATTCATTCACGGGATCATCAACGGGGCGTTCAACGCGCCTTTTTTCGTTACCAGGTTCAGGGAAGCCTTGTTTCATTACTCATCACTGTTTGATATGCTGGAGACAATCGTGCCGCGAGAGGACTGGGAGAGAATGCTGATAGAGAAGGAGATATTCGGGAGAGAAGCGTTGAATGTGATAGCATGCGAGGGATGCGAGAGATCGGAGAGGCCGGAGACATATAAGCAGTGGCAAGCTCGGATTCTAAGAGCAGGGTTTACACAGATTCCTTTTACTCGAGATCTAGTAGGGAGGGCAATGGAGAAGGTAAGGGGTAGCTACCACAAGGATTTTCTGATCGATGAAGACAGCAAGTGGTTGTTACAAGGTTGGAAGGGACGAATCATATATGCACTTTCTTGTTGGAGACCTTCCTGA 2235 0.4479 MTMDRGLWGFTDSRREQQLGNRSVPILQQNQGFENAFDRRREFRFLQSDQLPTNMNTPSSSTVTNEEHSPEDCDFSDAVLSYINQILMEEDMEDKTCMLQESLDLQAAEKSFYEALGEKYPPSPAQNHPSHRMNENDGGMGNNFPRNYNYGNFNGTFTHQSLSQNPNKFPSQLIRGNGISRSSYSSTSSVVSGVEGPVDSPSSIHQVPDLNCESQSISQFNKGVEEASRFLPNGNKLFADLGLSNLSPEEPQKSRTREISSAKVEKDEGDDFLGGSKVRKQPPRGEEDDEEEKCSKQAAVYTEPTLRSVMFDLVLLHTDGEGKNHYTARREALQNKTIKAVMPNGGQAKASNTSKGRGKKQNGRKAVVDLRTLLVLCAQAVAADDHKSAQELLKQIRQHSNPFGDGNQRFAHVFADGLDARLAGTGSQIYKGLISKKRSAADVLKAYHLYLAACPFRKMSNFFSNVTIRTASENSARVHIIDFGILYGFQWPTFIQRLVMKTGGQPPKIRITGIDFPQPGFRPAERIEETGRRLADYAKAFNVPFEYVAIAKKWETITLEELKIDRDEFLVVNCLYRAKNLLDESVAVESPRNAFLNLVRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERSERPETYKQWQARILRAGFTQIPFTRDLVGRAMEKVRGSYHKDFLIDEDSKWLLQGWKGRIIYALSCWRPS 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0050 744 Pfam GRAS domain family 370 742 IPR005202 -
Lele41g0050 744 MobiDBLite consensus disorder prediction 242 296 - -
Lele41g0050 744 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 282 735 IPR005202 -
Lele41g0050 744 MobiDBLite consensus disorder prediction 251 296 - -
Lele41g0050 744 ProSiteProfiles GRAS family profile. 361 742 IPR005202 -
Lele41g0050 744 MobiDBLite consensus disorder prediction 173 202 - -
Lele41g0050 744 MobiDBLite consensus disorder prediction 47 72 - -
Lele41g0050 744 MobiDBLite consensus disorder prediction 173 196 - -
Lele41g0050 744 MobiDBLite consensus disorder prediction 343 363 - -
Lele41g0050 744 MobiDBLite consensus disorder prediction 47 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0050 Lele-ChrLele41 361400 363634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0050 46 743 GRAS Transcription Factor Family AT2G37650 51.989 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele41g0050 GRAS 8e-113 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0050 41 361400 363634 Lele43g1310 43 21227719 21234894 hybridization
Lele41g0050 41 361400 363634 Lele44g1302 44 21291370 21293631 hybridization