Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0043 ATGGGTGATCCGTACCCTTATGGCCTGCTCGATTTCCAGCAACCCATATCCGCAAGAACCCACCACCATGTTTTCCCGGAGCCACCGTGTGTGGGTGGTGGCACCGCCGGTTCTGCAGTAGTAGCCACTACTCCACCACCACCTAATAATTACAACGTCGTTTCTTCTCATGGCTTTGCTACCACCTTTGCTCCTTCAAATCATCATCGTCATCGAGACTATTCCTCAAGCGTTGTCAATATTATTCCCACTTCCACAAACCCTACTGTTACTGCTTCGTCTTCTTTAGGAAATCATGGCACTACCACTGCATTCTATAGCAGCAGCAGTAGCATGGAGGCTGCAGAAAATGGTTGGCTTGGATTTGATGCTATGGCCAACAATAGATGGCCGAGACAAGAGACTCTTTTGCTCTTAGAGATCAGATCTCGTCTTGATTCAAAGTTCAGAGAGACCAATCACAAAGCCCCCTTATGGAATGAAATTTCTAGGATAATGAGTGAAGAATATGGGTACCAAAGAAGTGGGAAAAAATGCAAAGAGAAGTTTGAGAATCTGTACAAGTATTACAAGAAGACCAAGGAAGGGAAAGCAGGAAGACAAGATGGGAAACACTACAGATTCTTTCGTCAGCTTGAAGCAATATGTGGAGAATCAGCAACGAACAATAATATTACTACTTCGTCTGCTAATTACCAACCTCCGTTAATGACCTTCACAGATGGTGAAGTTCTTCATCACAACATTAAGCACTGCTCAAAGGGCCTCATCAGTCTGTCAAACAATTCATCAGACCAGTTCGAGACATCCTCGTCTGAAAACAATAATGATGACAAGGACCTATCGGCCATCACCTTTATGATGAAGCAAAAACAGGTGGATCAGATAGACCAGCGAAGAGACAGTGGAAGAATGAGGGTGAGGAAGAGCCTGAGAGTTGAGATTGAAGGGATTGTGGACTGTCACATGCGGAAGATGATAGAGAGTCAAGACGCTTGGATGGAGAAGATGATGAGTGTGGTTGAGCATAGAGAGCAAGAAATGGTGTATAAGGAACAAGAGAGGAAGAAAGATTCAATAAGATTCGATCAACAAGTGCATCAACTCTGGGCTAAAGAGAGAGCTTGGGTTGCAGAAAGAGACACTGAATTAATGGAGATCGTGAAGAATCACTTGGGAAAAGAGCTTATAACAACCGATCATTGTCATCATCATGAGCCTATGGCTGAAGAATATGAAGAAGAACCACAAACCAAGAGAACAAGAGCAAGAACAATTGGGGTGCACAGAACTGGAGATCTCAAATTTGATATATATAGCTAG 1323 0.4354 MGDPYPYGLLDFQQPISARTHHHVFPEPPCVGGGTAGSAVVATTPPPPNNYNVVSSHGFATTFAPSNHHRHRDYSSSVVNIIPTSTNPTVTASSSLGNHGTTTAFYSSSSSMEAAENGWLGFDAMANNRWPRQETLLLLEIRSRLDSKFRETNHKAPLWNEISRIMSEEYGYQRSGKKCKEKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEAICGESATNNNITTSSANYQPPLMTFTDGEVLHHNIKHCSKGLISLSNNSSDQFETSSSENNNDDKDLSAITFMMKQKQVDQIDQRRDSGRMRVRKSLRVEIEGIVDCHMRKMIESQDAWMEKMMSVVEHREQEMVYKEQERKKDSIRFDQQVHQLWAKERAWVAERDTELMEIVKNHLGKELITTDHCHHHEPMAEEYEEEPQTKRTRARTIGVHRTGDLKFDIYS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0043 440 ProSiteProfiles Myb-like domain profile. 128 187 IPR001005 -
Lele41g0043 440 PANTHER FI21293P1 82 394 - -
Lele41g0043 440 CDD GT1 128 194 - -
Lele41g0043 440 FunFam trihelix transcription factor PTL-like 130 192 - -
Lele41g0043 440 Gene3D - 130 192 - -
Lele41g0043 440 Pfam Myb/SANT-like DNA-binding domain 128 215 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0043 Lele-ChrLele41 302120 307686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0043 129 397 Trihelix Transcription Factor Family AT5G03680 47.601 2.85e-69 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele41g0043 Myb_DNA-bind_4 5.9e-20 CL0123