Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0038 ATGGTGGATAACATGGAAATCGACTCACCTTCGGAGTCCCAACCTCCCAAGCCTCGAGATCGAATCATTCGGAGGCTTCTTCAATTTGGAGTTCCCGATGATCAACTTGATCAGTCTCTCCTCGTTGATTTTATCAATGATAAAAAGTCGTTGACACCTGAACTAGTATCTGTTATATTACCTACGGATGAGGAAGTGGCTGAAGCACTGCAAGATTCTAAATTTGGTTCTAAAAAGTCCTCATTGGGTGTAACCATGAAGAAAAGATTCCATGAAAGCATGGTCTGGTTACAGTGGCTGATGTTTGAGGGTGACCCCGCCGCTGCCCTGAGGAACCTTTACAATCTGTCCATTGGGCAGCGTGGTGTTTGCGGGGCTGTTTGGGGACATAATGATATAGCATACAGGTGTAGAACATGTGAACACGATCCGACCTGCGCAATATGTGTACCTTGTTTTGAGAATGGGAATCACGAAGGCCATGATTACTTTGTGATATACACAGGCGGTGGTTGTTGTGATTGTGGAGATGTGACAGCGTGGAAGCGTGAGGGATTCTGCTCAAAGCATAAGGGTGCGGAGCAAATACAACCACTTCCGGAGGAGTTTGCGAACTCTGTGGAACCTGTGCTTAATTCTCTTTTCAGGTGTTGGAAAGAAAAGCTAACATCTGCAGAAACTGTCTCTCAGGAAAACTCTAGATCAAGCAACGCTGTTGTTGGAAGGAAGAAGGCGGCTAATGAGCTAACCTTTGCGATGGTTGATATGCTTTTAGAATTTTGCAAGCATAGTGAGAGTTTGCTTAGTTTTGTTGCTAGGTTGTTATTCTCTTCTGCTGGTTTACTTGCCATTCTGTTGAAAGCTGAGAGGTTTTTAACTGATGTTGTTGTAAGAAAACTTCATGAGTTACTCCTGAAATTGCTGGGGGAACCTGTTTTCAAGTATGAGTTCGCTAAAGTTTTCCTCAATTACTATCCGACTGTCATAAAAGAGGCTATGAACGAGTGCAGTGACCTTCCTCTGAAGAGGTATCCATTGCTATCCACGTTCTCCGTGCAGATACTTACAGTGCCCACTCTTACCCCTCGTCTGGTGAAGGAAATGAACCTCCTTACAATGCTGTTGGGATGTTTGGAAGATATTTTCATTTCTTGTGCTGGAGAAGATGGCCGATTACAGGTTGCAAGGTGGGGAAATTTGTATGAGACAACTATACGGGTTGTTGAAGATATTCGATTTGTTATGAGCCATGTGGTGGTTCCCAAATATGTCACCTATGATCAACAAGATATCTCAAGAATTTGGATGAGACTCTTGTCCTTTGTACAAGGGATGAACCCTCAAAAGAGGGAAACTGGTCAACATATAGAAGAAGAAAATGACAATGTCCATTTACCTTTTGTTTTAGGCCACTCTATTGCTAATATTCATTCTCTTTTGGTGGATGGGGCGTTTTCAGATGCTAGTATGGGCGAGTTGGACAATGAAATTATTTTGAGCTCAAATAAACAAGAATCAGATGGAGGTAATTTACAACACACAAAAGTGGGGTGGCTTTCCCAGGATAGCTCTGCATGTGGTATGACTGGTCAGAATAGTGCCTTTGCTTGTTCTTCAAAGGCTTCTGAGATAAAATCTAACGCTTCTTCTTCTCATCAACTACTTCCCCATTCTGTCACATGGTTGATATGTGAGTGTTTAGGGGCCATTGAGAATTGGTTGGAAATTGAAAATAAGACTTGGTTACTTCCAAATACGTCTTCTCCAAACAGTGGTAGCATCTATGACAGCAATCTTTCCGCATTAAAGAGAACAATATCCAATATCAGAAAGGGTAAGATTTTTCGTAGGCTTGCAAGTTCAAGTGAAGATCATGGTAGGTGCTTGGCTTCTGACGTGGAAAACAGTGAACATACAATGAAGGATAGTAAACTGAAAATAAATGTTGAATCTGAGTCAGATAATACCGATATTTCATCTGGTTTCAATGATAGCACAATGGAAACAGATGTTCCCACAGAACTGGGTGGCCTTCGTTTTTTGTCTTTGTCTGATTGGCCACAAATTGTCTATGATGTTAGTTCGCAAGATATCTCTGTCCACATTCCCTTACATCGGTTACTTTCCATGCTGTTACAAAGGTCACTGAGAAGATATTTTGGTGAATCTGGAATGCCGGATGTGTCTGATGCTTGTTCTACTAATTCATTATCAACAATCTACACTGACTTCTTTGGACATGCTTTACGGAGTAGTCATCCTTATGGCTTTTCTTCCTATATAATGGAACATCCCTTGCGCATTAGAGTTTTCTGTGCTGAATTTCATGCCGGAATGTGGAGGAAAAATGGAGATGCTGCTCTTTTATCTTGTGAATGGTATCGGTCTGTTCGCTGGTCTGAACAAGGGCTGGAGCTTGATCTATTTCTTCTTCAGTGTTGTGCTGCACTAGCTCCGCCAGATCTGTATGTCAGCAGAATTCTGGAGCGCTTTGGGCTTTCAAACTACCTATCCTTGAATCTTGAATGTTCAAGCGAGTATGAACCTGTTTTAGTCCAGGAAATGCTCACTCTTTTGATTCAGATATTGAAAGAAAGGCGCTTTTGTGGGCTAAGTTCTTCTGAAAGCTTGAGAAGAGAACTAATTTATAAGTTAGGCATCGAAGATGCCACTCATAGTCAGTTGGTGAAGTCTCTTCCTCGTGATCTCTCCAAGTTTGAGCAGCTTCAAGAGATTATAGATACAGTTGCTGTATTTTCTAACCCAACTGGTTTTAATCAGGGTATGTATTCCCTGCGATGGTCATTGTGGAAAGAATTGGATTTATATCATCCTCGTTGGAATTCAAAGGATTTACAAGTTGCAGAAGAAAGATATTTACGCTTCTGTGGTGTCTCTGCACTAACCACACAGCTTCCCCGTTGGACCAAAATTTATCCTCCTCTGGAAGGGATTTCAAGGATAGCCACTTGTAAAGTGGTTCTACAGATAATCCGCGCGGTTCTATATTATGCTGTTTTTACTTTTAAATCAGCTGAATCTCGTGCTCCTGATGCTGTTCTTCTAACTGCACTGCATTTACTGTCATTATCTTTAGATATCTGTCTTCAGCAGAAAGAATTTACTGACAAGACATTTGATGATGAGACACAAATTCCCATAATAGCTTTGTCTGGAGAAGTAATTGGTGAAAGCTCTGTTTATGGTGTTGGTGAACAGAGCTTGTTATCACTTCTTGTTAATTTGATGGGTTTGCACAGGAAGGAAAGTGCAGACAACTTTGTAGAAGCAGGTGGTGACAACCTGTCTGCTTTATTTGAAGACTTACTGAAGAAGTTTGCTGAGATTGACAACAGATGCATGACTAAGTTGCAGCAACTTGCCCCTGGAGTTGTTAGTCATATATCTCAATGCCTTCCAACTAGAGACTTAGGTGACATGGTTTCAGCTTCCGATAGTGAGAAACGCAAGGCAAAAGCCCGGGAGAGGCAGGCTGCTATGTTGGAGAAGATGAGAGCTCAACAATCGAAATTTTTGGCAAGTGTCGATTCCACTGGAGATGATAGTTCCCAAGTTGATCCTGAAGATGACTTTGATACTGGACCTGATGCTGAAGAATCCACACAAGTTGTTTGTTCTCTTTGCCATGATTACAATTCGAAACTTCCCATATCTTTTCTGATTCTTCTACAGAAATCTAGGCTTGTCAGTTTTGTTGACAGAGGTCCCCCATCATGGTCCCAACTTCGTCGGACAGATAAAGAACATATGTCTGTTTTCAACCTTAAGGCGACAGATGCAATGGCAATGGACTGGACTTCAGGCACTTCAGGGTCTACTTCATCTTCTCGCTTGGCCCAGTTGGTTTTAAATGCTGCCAACCAATTGGTCTCTAGTGGGCAGCGTGGTGAAGTCAATGCTTTTTTGCAATATTTAAAGGATCAGTTTCCAACATTGGGAAATATCCAGCTTCCTGATGCATCTTATGATGAAAAAGAGAAGATTCCATATACTTTTGAGACATTGGAACAGGATATGTACTTCTCCATTTGTGGAGAAATGAACGATGGTAATAAAATTTCTTCTTCAGGAGGGGACCCAAACATTGGTAGAGATGCTGGATCTGTCTTGGTTGCAAAATACATAGCTGATATTGCAAGAGACATGTCGAAAAACTCTCCAGCATCTGAAAATGTTCATAGTGAGAATACTTCTGTAGAATCTACTTTGCAGCACATGGCAAACGGTTCATTTGGCCCAACAGATTGTGATGGACTTCATCTTTCTTCCTGTGGTCATGCATTACATCAGGAATGCCTTGATCGTTATTTATCTTCGCTGAAGGAAAGGTCCGTCAGAAGAATTGTTTTTGAAGGAGGACATATTGTTGACCCAGACCAGGGTGAATTTCTGTGCCCTGTATGCCGCCGGCTTGTAAACTGTGTCTTGCCTACTATACCTGGAAACTTAGAGAAGCCTTTGAAGCAGCCTACAGGTTTAATTAATGGCTCACTACCTGCTACAGATCCCGTGGCTGCATCAAGTAAAGAGATGTATTCACTCCGCCTTTCACAAGCCTTGAAGATCTTGCAATCTGCTTCTAATGCTGTTGGGAAGGATGAATTCCAAAAAGCTGTTCCTTTGCGGCAGAGTGATAAAACAGGCCAAAATCTTGAGCATTTCTCTCGGATGTTGGCTAAAATGTATGTGCCAAACAAACAAGATAAATTATCAAGATCTGCAAGATTAAATCACTCAATGCTTATGTGGGACACTCTTAAGTACTCCATGATGTCAATGGAGATTGCTGCACGATGTGGAAAGACTTCTTTAACTCCAAACTATGCTCTTAGGACCATGTATGAAGAGCTGAAGTCTTCGAGTGGATTTATTTTATCCTTGCTGTTGAAACTTGTTCAGAAGTCAAGGAGTAAGAATTCTCTTCATGTGCTTCAAAGATTTAGAGGTCTTCAACTCTTTGCAGAATCTATTTGTTCTGGAGTGTCTGAGAGAGATGATATGTTGTCTATCTTCAAACATTTTGAAGGGGACCTATCTAATTCCGACATTCTATTTTGGAGGCGAGCTTCTGATCCTGTACTTGCACATGACCCTTTTTCAACGTTGATGTGGATTCTCTTTTGTCTTCCATCCCCATTTCTGTCTTGTGAAGTATCTTTGTTATCCCTTGTGCATGCTTTCTACATAGTAGCTGTAACTCAGGCTATTATTTTGTATCGTGTGAAAACCCAGCACAAATTATGTGAATTAGGTGTTTCTGATTGCCTAATCACTGACATATATAAGGTTATGGGTGAATCTGGATGTAATCAGCAGTATTTTGTGTCAAACTATTTTGACCATAGCGCTGATGTTAAAGATGTAATTAGGAGGTTCACTTTCCCCTATTTGCGAAGATGTGCGCTGTTGTGGAAAATATTATATTCTTCTATTCCAGCACCATTCTGTGATGAGGACAATGTATTAGATAGATCATGGAGTTATACAAATGACACAATGGTTGGACCTAACGTTGACATGTTTGAGATTACTAAAATTCAAGAGCTTGAGAACATGTTTAAGATTCCTGCCCTTGATGTGGTTCTGAAGGATGAATTTTCAAGATCTTCAGTCTCTATTTGGTGTCGTCAATTTTGCAAGGAATTTGAACTAGCTGGGGTTCAACGTACCATGCATTTAAACCCTGCAGTTCCATTTGAATTGTTGAGATTGCCAAATGTTTATCAGGATCTTCTGCAGAGGTGTATCAAACAGCGCTGCCTTGAATGCAAATCTCTTCTTGATGAACCTGCATTGTGCCTGCTGTGTGGTAGATTGTGCTCCCCAAGTTGGAAATCTTGCTGCAGGGTAAGTGGTTGCCAAACACATGCTATAGCCTGTGGATCGGGTACTGGAGTGTTTCTGTTGATTAGGAGGACAACAATCCTACTGCAAAGATCCGCACGTCAAGCTTCCTGGCCCTCTCCTTACTTGGATGCTTTTGGTGAGGAGGATTTTGAAATGCGTCGGGGCAAACCTCTTTACCTGAATGAGGAACGTTATGCTGCCTTGACCTACATGGTTGCTTCTCATGGCTTGGACCGAAGTTCCAAGGTTCTTGGCCAGACTACCATTGGATCCTTCTTCTTGGTTTAA 6156 0.4152 MVDNMEIDSPSESQPPKPRDRIIRRLLQFGVPDDQLDQSLLVDFINDKKSLTPELVSVILPTDEEVAEALQDSKFGSKKSSLGVTMKKRFHESMVWLQWLMFEGDPAAALRNLYNLSIGQRGVCGAVWGHNDIAYRCRTCEHDPTCAICVPCFENGNHEGHDYFVIYTGGGCCDCGDVTAWKREGFCSKHKGAEQIQPLPEEFANSVEPVLNSLFRCWKEKLTSAETVSQENSRSSNAVVGRKKAANELTFAMVDMLLEFCKHSESLLSFVARLLFSSAGLLAILLKAERFLTDVVVRKLHELLLKLLGEPVFKYEFAKVFLNYYPTVIKEAMNECSDLPLKRYPLLSTFSVQILTVPTLTPRLVKEMNLLTMLLGCLEDIFISCAGEDGRLQVARWGNLYETTIRVVEDIRFVMSHVVVPKYVTYDQQDISRIWMRLLSFVQGMNPQKRETGQHIEEENDNVHLPFVLGHSIANIHSLLVDGAFSDASMGELDNEIILSSNKQESDGGNLQHTKVGWLSQDSSACGMTGQNSAFACSSKASEIKSNASSSHQLLPHSVTWLICECLGAIENWLEIENKTWLLPNTSSPNSGSIYDSNLSALKRTISNIRKGKIFRRLASSSEDHGRCLASDVENSEHTMKDSKLKINVESESDNTDISSGFNDSTMETDVPTELGGLRFLSLSDWPQIVYDVSSQDISVHIPLHRLLSMLLQRSLRRYFGESGMPDVSDACSTNSLSTIYTDFFGHALRSSHPYGFSSYIMEHPLRIRVFCAEFHAGMWRKNGDAALLSCEWYRSVRWSEQGLELDLFLLQCCAALAPPDLYVSRILERFGLSNYLSLNLECSSEYEPVLVQEMLTLLIQILKERRFCGLSSSESLRRELIYKLGIEDATHSQLVKSLPRDLSKFEQLQEIIDTVAVFSNPTGFNQGMYSLRWSLWKELDLYHPRWNSKDLQVAEERYLRFCGVSALTTQLPRWTKIYPPLEGISRIATCKVVLQIIRAVLYYAVFTFKSAESRAPDAVLLTALHLLSLSLDICLQQKEFTDKTFDDETQIPIIALSGEVIGESSVYGVGEQSLLSLLVNLMGLHRKESADNFVEAGGDNLSALFEDLLKKFAEIDNRCMTKLQQLAPGVVSHISQCLPTRDLGDMVSASDSEKRKAKARERQAAMLEKMRAQQSKFLASVDSTGDDSSQVDPEDDFDTGPDAEESTQVVCSLCHDYNSKLPISFLILLQKSRLVSFVDRGPPSWSQLRRTDKEHMSVFNLKATDAMAMDWTSGTSGSTSSSRLAQLVLNAANQLVSSGQRGEVNAFLQYLKDQFPTLGNIQLPDASYDEKEKIPYTFETLEQDMYFSICGEMNDGNKISSSGGDPNIGRDAGSVLVAKYIADIARDMSKNSPASENVHSENTSVESTLQHMANGSFGPTDCDGLHLSSCGHALHQECLDRYLSSLKERSVRRIVFEGGHIVDPDQGEFLCPVCRRLVNCVLPTIPGNLEKPLKQPTGLINGSLPATDPVAASSKEMYSLRLSQALKILQSASNAVGKDEFQKAVPLRQSDKTGQNLEHFSRMLAKMYVPNKQDKLSRSARLNHSMLMWDTLKYSMMSMEIAARCGKTSLTPNYALRTMYEELKSSSGFILSLLLKLVQKSRSKNSLHVLQRFRGLQLFAESICSGVSERDDMLSIFKHFEGDLSNSDILFWRRASDPVLAHDPFSTLMWILFCLPSPFLSCEVSLLSLVHAFYIVAVTQAIILYRVKTQHKLCELGVSDCLITDIYKVMGESGCNQQYFVSNYFDHSADVKDVIRRFTFPYLRRCALLWKILYSSIPAPFCDEDNVLDRSWSYTNDTMVGPNVDMFEITKIQELENMFKIPALDVVLKDEFSRSSVSIWCRQFCKEFELAGVQRTMHLNPAVPFELLRLPNVYQDLLQRCIKQRCLECKSLLDEPALCLLCGRLCSPSWKSCCRVSGCQTHAIACGSGTGVFLLIRRTTILLQRSARQASWPSPYLDAFGEEDFEMRRGKPLYLNEERYAALTYMVASHGLDRSSKVLGQTTIGSFFLV 2051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0038 2051 MobiDBLite consensus disorder prediction 1181 1204 - -
Lele41g0038 2051 Gene3D - 871 963 IPR042065 -
Lele41g0038 2051 CDD RING-H2_UBR1_like 1424 1484 - -
Lele41g0038 2051 FunFam Putative e3 ubiquitin-protein ligase ubr3 124 192 - -
Lele41g0038 2051 ProSiteProfiles Zinc finger UBR-type profile. 122 192 IPR003126 GO:0008270
Lele41g0038 2051 Gene3D - 124 192 - -
Lele41g0038 2051 PANTHER UBIQUITIN LIGASE E3 ALPHA-RELATED 44 2049 IPR039164 GO:0061630|GO:0071596
Lele41g0038 2051 MobiDBLite consensus disorder prediction 1189 1203 - -
Lele41g0038 2051 Pfam Proteolysis_6 C-terminal 1567 2029 IPR044046 -
Lele41g0038 2051 SMART push_1 122 191 IPR003126 GO:0008270
Lele41g0038 2051 Pfam Putative zinc finger in N-recognin (UBR box) 124 190 IPR003126 GO:0008270
Lele41g0038 2051 SUPERFAMILY "Winged helix" DNA-binding domain 875 961 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0038 Lele-ChrLele41 257249 274180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0038 16 2049 Acyl Lipid Metabolism Gene Families AT5G02310 51.773 0.0 1895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0038 41 257249 274180 Lele41g0038 41 257249 274180 ECH
Lele41g0038 41 257249 274180 Lele43g1321 43 21308493 21325354 hybridization
Lele41g0038 41 257249 274180 Lele44g1313 44 21360687 21380157 hybridization