Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0036 ATGAAGAGGTACTTCACTATTGGAAATTCACTATCTTTTCTCGATTTTGTTGGTTTTTGCTCGCCAAATTCAGCTCGCTTTCTTCTCATTTCTACCTCTGTGTTTGATCGAGTCTTTACGCAAGATATGGCTGAATTGAAATCAGAAGAGTGTTGCCTAGAGAATAAGCAATCTACTGCTGCCTCTACCTCCTCCATCTCTGAAGGCAGTACCAGTGCTATACACAAGTCTCCTGGAAGATGTAGTCCAGCATCAACGTCACGCTCCCATCGGAGGACCACTGGTCCCATCAGGCGTGCAAAGGGCGGTTGGACAGCCCAGGAGGATGAGACATTGAGGAATGCTGTTGCAGCTTTCAAGGGCAAGAGTTGGAAGAAAATAGCTGAGTATTTTCCTGATAGATCAGAAGTGCAATGTCTGCACAGATGGCAAAAGGTTCTTAATCCTGAACTTGTTAAAGGCCCTTGGACTCCTGAGGAGGATGACAAAATTGTTGAACTGGTATCAAAGTATGGGCCAGCAAAATGGTCTATGATAGCTAAATCTTTGCCTGGTCGCATTGGGAAACAGTGTCGAGAGCGATGGCACAATCATCTTAATCCTGAAATAAAGAAAGAGGCCTGGACTTTGGAGGAAGAACTGGCCCTCATGAATGCTCATCGCATACATGGGAACAAGTGGGCTGAAATAGCTAAGGTTTTGCCCGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAAAAATTAGAATTTTATTTAGCTACAGGAAACCTTCCACCAATCCAAAAGAGCAGTGCACAAGGTGGTGTGAAAGATACAATAAGACGCTCTGCTAGTAAAACCGTACATGCTTGCTCAAATAAAGTATCAGATACAGCTGCTGATACATCATCAGAAAATACAGACAATACTAAAGATGGCAGTGGCAGTGGAAAGAATCAACTAGAGTCCTTGGCAACAGTGAGAGAGTTTGGTAATTCTCTGAGCGTTCCTGCAAATGAAGGTGCTGATTCTGACTTTGTAGAATGGAAGCCCAGATCATCCAATCTAGATCTCGGCTATAGCAACTCAGAACCAGTGTCAAGGGATAATTTTGGATTGACCAGTGACCCAAAATTTGATGACACTGGACTGAATGGCAAGCATAAAGTTGGGAATTTTGTGAATAATGGTGAAATGAGCAGTAGCAGGCTAATTAATACATCTTTTTCACGGCATAGTCCAGCCTCTGGTTCTTTGTGTTATGAGCCTCCATTGTTGGAGAGCTCGGTTCCTTTAGATTCCATTTATTTAAATATGTATTGCCTGCAGAACGAGTACAATGCTACTGCAGTGACGTCACCCGTTGGTTTCTTCACTCCACCTTGTGTGAAGGGCAGTGAATTATGCACAGGGACTCCTGAATCAATATTGAAAATGGCTGCTAAAACTTTCCCATATACTCCTTCCATATTGAGGAAGAGAAAGAATAGAATCCAAGCACATGTAACTCCTTGTAAAGTTGTGAAAGTGGATGATGGATTTCATACTCCTAATGAACAGGAGGAAACCAAGTATAATGATGGTTCTGGATATGGAGAGCTCTGTGAGAGTCCGGCAAGGGATGACAGTCTAAATAATAAGGCTTTCAATGCTTCTCCCCCTTACCGGTTAAGATTCAAGCGAAAAGCATTTGTCAAGTCTGTGGAGAAACAACTTGAGTTTGCTTTTGATAAAGAGAAGCATGATGGAAACAAAATGGAAAAATCTGCTAGGAGCACTGCGATGGCTGGAGATTGTTTGCCTGAAACAAAAGTGGAAGTGACCTAG 1824 0.4254 MKRYFTIGNSLSFLDFVGFCSPNSARFLLISTSVFDRVFTQDMAELKSEECCLENKQSTAASTSSISEGSTSAIHKSPGRCSPASTSRSHRRTTGPIRRAKGGWTAQEDETLRNAVAAFKGKSWKKIAEYFPDRSEVQCLHRWQKVLNPELVKGPWTPEEDDKIVELVSKYGPAKWSMIAKSLPGRIGKQCRERWHNHLNPEIKKEAWTLEEELALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPIQKSSAQGGVKDTIRRSASKTVHACSNKVSDTAADTSSENTDNTKDGSGSGKNQLESLATVREFGNSLSVPANEGADSDFVEWKPRSSNLDLGYSNSEPVSRDNFGLTSDPKFDDTGLNGKHKVGNFVNNGEMSSSRLINTSFSRHSPASGSLCYEPPLLESSVPLDSIYLNMYCLQNEYNATAVTSPVGFFTPPCVKGSELCTGTPESILKMAAKTFPYTPSILRKRKNRIQAHVTPCKVVKVDDGFHTPNEQEETKYNDGSGYGELCESPARDDSLNNKAFNASPPYRLRFKRKAFVKSVEKQLEFAFDKEKHDGNKMEKSARSTAMAGDCLPETKVEVT 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0036 607 SUPERFAMILY Homeodomain-like 98 161 IPR009057 -
Lele41g0036 607 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 148 203 IPR017930 -
Lele41g0036 607 MobiDBLite consensus disorder prediction 63 91 - -
Lele41g0036 607 MobiDBLite consensus disorder prediction 580 607 - -
Lele41g0036 607 CDD SANT 155 199 IPR001005 -
Lele41g0036 607 CDD SANT 104 147 IPR001005 -
Lele41g0036 607 FunFam Transcriptional activator Myb isoform A 153 205 - -
Lele41g0036 607 SUPERFAMILY Homeodomain-like 150 246 IPR009057 -
Lele41g0036 607 ProSiteProfiles Myb-like domain profile. 148 199 IPR001005 -
Lele41g0036 607 PANTHER MYB PROTEIN-RELATED 101 186 - -
Lele41g0036 607 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 254 IPR017930 -
Lele41g0036 607 ProSiteProfiles Myb-like domain profile. 96 147 IPR001005 -
Lele41g0036 607 MobiDBLite consensus disorder prediction 284 318 - -
Lele41g0036 607 ProSiteProfiles Myb-like domain profile. 200 250 IPR001005 -
Lele41g0036 607 MobiDBLite consensus disorder prediction 63 97 - -
Lele41g0036 607 CDD SANT 207 250 IPR001005 -
Lele41g0036 607 Gene3D - 100 151 - -
Lele41g0036 607 Gene3D - 152 205 - -
Lele41g0036 607 Pfam Myb-like DNA-binding domain 205 248 IPR001005 -
Lele41g0036 607 Pfam Myb-like DNA-binding domain 101 147 IPR001005 -
Lele41g0036 607 Pfam Myb-like DNA-binding domain 153 199 IPR001005 -
Lele41g0036 607 Gene3D - 206 286 - -
Lele41g0036 607 SMART sant 204 252 IPR001005 -
Lele41g0036 607 SMART sant 100 149 IPR001005 -
Lele41g0036 607 SMART sant 152 201 IPR001005 -
Lele41g0036 607 FunFam Transcriptional activator Myb isoform A 100 152 - -
Lele41g0036 607 FunFam Transcription factor MYB3R-2 206 269 - -
Lele41g0036 607 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 147 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0036 Lele-ChrLele41 246169 252715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0036 11 597 MYB Transcription Factor Family AT3G09370 46.244 5.64e-151 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele41g0036 Myb_DNA-binding 3.1e-14 CL0123