Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0033 ATGGGTAACGGTATTGGAAAAATCTGCCTCTGCTCCTCCGGTGTCGGAGATATCTCCCGCCGCTACGAGATGTTTCCCTCCAATCCCTACGAAAGGTCTCTCGGAAATTCAATCTGCTACACTCGACCCGACCCATTTAGATTATCGTCCTCCTCCAATATTTTCTCCGACGAGGATTCCACCACGCAGATGACTTTCAGATCAATCTCCGGCGCCTCCGTGAGCGCCAACTCTTCCACCCCGCCTTCCATATATCTTGCCAATTCCTCCCAACACGGGGGTTCTGCTTTTGACGCGACGGCCTCGTTTGAGTCCTCCACTTCCTTCACCTCCATGCCCCTTCATTATCATCAGCCCCGTGGCTCCTCCGTTGGAAGCTCCGGCACGGTGTCGAGTCCCTTGGATGGCAGGTTCTCTTATTCGGGTTCGGGACCTATCGTGAGGCTTGAGCCGAGATTGAATGGGGGCTCCGTTGAAGAACAGCGAGAATGCTCTGAATCATTGAAATTCAAAAGGAGCTTATCTGATCACAACAATGGGTCTTTGATGAAACCCGGTAAGAGTTTGAAGAAGATTTTTCGGCGAGCGATTTCCAGCGTCACACCGATCAAAGGGGTGGCTTCGATCGGAGAGTCCACTTCAGAGAAGAAAAGAAACGATGATGAAGACGAGGTCGAAAATGATGAAGGTTCTGCAGTGCAAAGTATGAATTTTCAGTGGGCTCAAGGAAGAGCAGGGGAAGATAGAATTCATATCGTGATTTCCGAGGATGATGGATGGGTTTTCGTTGGAATTTATGATGGATTTAACGGCCCAGACGCCACTGATTATCTTCTGAGCAATCTCTTCTGGTCTGTTCATACTGAGTTGAAGGAGCTCCTCGGTAATGGCAATTCAGAATCAACAAATGAAGAGTGTCTGAGTCATTCTGATGTGCTAAGAGCACTTTCGGAGGCATTAAGGAAAGCAGAGGACGAATTTCTGAAGGATTCTGATGAGACAATAACGAAGGATCCAGTGTTAGCTATGATGGGTTCTTGTGTATTGGTGGTGTTGATGAAAGGAGATGATGTTTACGTAATGAATGTTGGGGACAGTCGAGCAGTTTTAGCTCAGAGTTCAGAGCATGGTTTAAATTCTCTTCAGCTCACTGAAGATCACAGTACAAACGTGAAAGAGGAGGTTCAGAGAATCAGGAGGGAACACCCAGACGATCCTTCAGCAGTAATTAAAGGCAGAGTGAAAGGCCACTTGAATATCACTAGGGCTTTTGGGGCTGGTTTCCTCAAGCAGCCAAAATATAACAATGCAGTATTAGAGACATTCAGAGTGGACTATAAAGGGGATTCAGCCTACATCACATGTTCACCTTCACTTAAGCACCACACGCTGAGCCCTAGTGACAGATTCTTGATATTGTCCTCCGATGGACTTTACCAGTACTTCACCAATGAAGAGGCAGTCCACAGAGTTGAATTTTTCATCACCTTGTATCCGGAAAGAGATCCTGCACAGCTTCTCATTGAAGAAGCTTTGGCCAGAGCAGCAACAAAAGCTGGTATGGATTTCTATGAGTTACTGGAAATCCCACAAGGAGAACGACGTTTATTTCATGATGATATTTCCGTTGTCGTAATCTCCTTGGAGGGCAAAGTATGGCGCTCATCAGCCTCATCTACACATTAA 1686 0.4668 MGNGIGKICLCSSGVGDISRRYEMFPSNPYERSLGNSICYTRPDPFRLSSSSNIFSDEDSTTQMTFRSISGASVSANSSTPPSIYLANSSQHGGSAFDATASFESSTSFTSMPLHYHQPRGSSVGSSGTVSSPLDGRFSYSGSGPIVRLEPRLNGGSVEEQRECSESLKFKRSLSDHNNGSLMKPGKSLKKIFRRAISSVTPIKGVASIGESTSEKKRNDDEDEVENDEGSAVQSMNFQWAQGRAGEDRIHIVISEDDGWVFVGIYDGFNGPDATDYLLSNLFWSVHTELKELLGNGNSESTNEECLSHSDVLRALSEALRKAEDEFLKDSDETITKDPVLAMMGSCVLVVLMKGDDVYVMNVGDSRAVLAQSSEHGLNSLQLTEDHSTNVKEEVQRIRREHPDDPSAVIKGRVKGHLNITRAFGAGFLKQPKYNNAVLETFRVDYKGDSAYITCSPSLKHHTLSPSDRFLILSSDGLYQYFTNEEAVHRVEFFITLYPERDPAQLLIEEALARAATKAGMDFYELLEIPQGERRLFHDDISVVVISLEGKVWRSSASSTH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0033 561 SMART PP2C_4 229 546 IPR001932 -
Lele41g0033 561 PANTHER PROTEIN PHOSPHATASE 2C 221 547 IPR015655 GO:0004722|GO:0006470
Lele41g0033 561 Coils Coil 381 401 - -
Lele41g0033 561 CDD PP2Cc 245 548 IPR001932 -
Lele41g0033 561 Coils Coil 313 333 - -
Lele41g0033 561 Pfam Protein phosphatase 2C 255 518 IPR001932 -
Lele41g0033 561 MobiDBLite consensus disorder prediction 208 232 - -
Lele41g0033 561 Gene3D - 208 557 IPR036457 -
Lele41g0033 561 ProSiteProfiles PPM-type phosphatase domain profile. 230 548 IPR001932 -
Lele41g0033 561 SUPERFAMILY PP2C-like 244 549 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0033 Lele-ChrLele41 227632 229667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0033 1 555 PP2C-type Phosphatase Gene Family AT2G28890 47.400 3.55e-178 516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0033 41 227632 229667 Lele41g0033 41 227632 229667 ECH
Lele41g0033 41 227632 229667 Lele43g1325 43 21347313 21349432 hybridization