Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0028 ATGAGCTTGTGTGTGTTCTTGTTATGTCTCAGTGGAACGGCTTTTGCTCAGTTATCCTCCACATATTACTTACTCTCATGTCCTCTTGCTCTTTCTACCATTGAGACCCAAGTACTCGCAGCTGTGTCCAATGAGTCTCGCATGGGTGCATCCTTGCTCCGTCTCCATTTCCACGACTGCTTCGTCCAAGGATGTGATGCATCGGTATTATTGGACGACACGGCAAATTTCAAGGGTGAAAAAACTGCATTTCCCAACAATAATTCTCTGAGGGGCTTTGATGTTATAGATAAGATCAAATATGAACTAGAGCAATTGTGTCCCGGCGTCGTCTCATGTGCTGACATTTTGGCGGTTGCTGCGAGGGACTCTGTTTATGCTCTGGGTGGACCGCATTGGGAAGTGAAATTGGGAAGAAAAGACTCAAGCACAGCAAGTTTAAGTGATGCTAATAAGGATTTACCTGCACCCTTCCTCAATCTCAGTGGCCTCGTCACTGCTTTCTACAACAAAGGCTTCACTCAGCAAGAGATGGTTGCTTTGTCTGGGGGTCACACAATAGGGATGGCGAAGTGCAAGACGTTCAGGAACAGGATCTACAACGACACCAACATAGAGTCGTCGTTTAAAGCGTCGGAGCAAGCGGTGTGTCCAGCGGCAGGCGGAGACGACAATCTATCCTTCTTCGACGCCAGCAATGACGGAAACTGTTTCGATAACTATTACTACCAAAACTTGATGGATCAGAAGGGTCTGTTGCATTCTGACCAAGAGCTCTTCAATGGAGGCGCCACTGACTCTCTGGTTCAATCTTACGCCCAGTATTCTTCCCTTTTCTTCCACGACTTTGCTAATGCCATGATTAAAATGAGTGAGCTCACTCCTCTCACCGATCCCAATGGTCAAGTTAGGACCGATTGCAGAAAAGTCAATTGA 936 0.4679 MSLCVFLLCLSGTAFAQLSSTYYLLSCPLALSTIETQVLAAVSNESRMGASLLRLHFHDCFVQGCDASVLLDDTANFKGEKTAFPNNNSLRGFDVIDKIKYELEQLCPGVVSCADILAVAARDSVYALGGPHWEVKLGRKDSSTASLSDANKDLPAPFLNLSGLVTAFYNKGFTQQEMVALSGGHTIGMAKCKTFRNRIYNDTNIESSFKASEQAVCPAAGGDDNLSFFDASNDGNCFDNYYYQNLMDQKGLLHSDQELFNGGATDSLVQSYAQYSSLFFHDFANAMIKMSELTPLTDPNGQVRTDCRKVN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0028 311 PANTHER PEROXIDASE 72-RELATED 16 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 Gene3D Peroxidase, domain 2 155 290 - -
Lele41g0028 311 ProSitePatterns Peroxidases active site signature. 49 60 IPR019794 GO:0004601
Lele41g0028 311 Pfam Peroxidase 36 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 FunFam Peroxidase 155 290 - -
Lele41g0028 311 CDD secretory_peroxidase 17 310 IPR033905 GO:0004601|GO:0042744
Lele41g0028 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Lele41g0028 311 SUPERFAMILY Heme-dependent peroxidases 17 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 Gene3D - 21 308 - -
Lele41g0028 311 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele41g0028 311 FunFam Peroxidase 21 160 - -
Lele41g0028 311 ProSiteProfiles Plant heme peroxidase family profile. 17 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0028 Lele-ChrLele41 208432 209751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0028 16 311 Peroxidase AT5G05340 56.376 6.98e-125 358