Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0023 ATGGTTTTTTCTTCCATGCATCCTTATCTTGATCCAGCCAACTGGCCGCAGCAACAGCAGCAGAGTCATCAGATTGGAAGTAGCAGTGGCCCGGGTTCTCAGCTTCTTCCTCCTCCTCCGCCGCCACTGCCACCTTCTCAGTCTCATGGAGCTAGTGGCTCCGGTTCCATCCGGCCTGGTTCCATGGCTGATAGGGCTCGGATGGCCAACATGCCGATGCCGGAGGCGGCGCTCAAATGCCCTCGCTGCGATTCCACCAATACTAAGTTCTGCTACTTCAACAACTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACCTGTAGAAGGTACTGGACCCGAGGTGGGGCCATGCGAAATGTCCCTGTCGGCGGGGGATGCCGTAGGAACAAGAGAAGTAAGGGAAGCAGCTCAAAGTCGCCGCCGGTGAGCTCAGGTCGCCAGACAGGCAGTGCTACTTCAAACAACTCTGTGCCTTCCAACAGTGCTTCTGCCGCTGATGTGGTAGGCCTTTCGCCTCAGCTTCCATCATCGCTGAGGTTCTCGGCTCCTACTTTGCATCAACTCACTGAGTTTGGATCCGGAGAGATGGGATTGAGTAACTATGGTTTGAGTAATCAAATGGGAGGAGTTGGTGACTTAAGTTTCCATATAGGAACCGATTTGTCCGGTGGAGCAAGCGGCAGCGGCAGCTCCATCTTATCCCCCGCCGGGTTAGAGCAGTGGCGGATGTCACAAACACAACAGTTTCCCTTCTTAACTGGTTTGGAAGCTTCGCCTGATTTGTACCAATTTCAAAGTGGAGCTGCAGGGCCGGGATATGGCGGCGGCGCAAGTCAGCTCCGGCCAAAGGTGCCAAGTGGGGTGATAACTCAACTAGCTTCAGTGAAGATGGAAGACCGTCATAATCATCGCCAGGAGCTAAATTTGTCAAGGCACTTCTTGGGGATGAATAGTAATTCAACAAATCATGAGCAGTATTGGAATACTACAGCCGGTAATTCTAATACTACTGCTAATTGGACTGAGCTTTCTGGGTTTCGCTCTTCTTCCACTACTAGCAACAATCCACCATAG 1077 0.5246 MVFSSMHPYLDPANWPQQQQQSHQIGSSSGPGSQLLPPPPPPLPPSQSHGASGSGSIRPGSMADRARMANMPMPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRNKRSKGSSSKSPPVSSGRQTGSATSNNSVPSNSASAADVVGLSPQLPSSLRFSAPTLHQLTEFGSGEMGLSNYGLSNQMGGVGDLSFHIGTDLSGGASGSGSSILSPAGLEQWRMSQTQQFPFLTGLEASPDLYQFQSGAAGPGYGGGASQLRPKVPSGVITQLASVKMEDRHNHRQELNLSRHFLGMNSNSTNHEQYWNTTAGNSNTTANWTELSGFRSSSTTSNNPP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0023 358 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Lele41g0023 358 MobiDBLite consensus disorder prediction 119 165 - -
Lele41g0023 358 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 54 269 IPR045174 GO:0003700|GO:0006355
Lele41g0023 358 MobiDBLite consensus disorder prediction 136 165 - -
Lele41g0023 358 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Lele41g0023 358 MobiDBLite consensus disorder prediction 11 32 - -
Lele41g0023 358 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Lele41g0023 358 MobiDBLite consensus disorder prediction 11 62 - -
Lele41g0023 358 MobiDBLite consensus disorder prediction 33 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0023 Lele-ChrLele41 181939 183196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0023 19 353 C2C2-Dof Transcription Factor Family AT3G55370 43.391 5.90e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele41g0023 zf-Dof 3.4e-32 No_clan