Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0021 ATGCCAAGGCCGAGGCGGTTCTTGAGCAACCACAACAATCACCACCAGATGCCGAGGCAGCAATCTTTCTCTCTTCTTCGTCTTCCCTTCTTCAACCTTCTTTTTCTGCTTCTTCCTCATCTTTCGTCTTCTTTAAACAGTGAAGCTCATGTTCTGCTTTCATGGCTCCACACTTCCTCCTCCTCCTCCTCCTCTGTTCCTCCGTCGTCTATCTCTGACTGGAGCCCTTCAAACCCCAACCCTTGTAACTGGTCTTTCATCAAATGCTCTCCACAAAACTTAGTCACAGAGATAAACATTCAAGCAACTGAATTAGATCTTCCTTTTCCTCCCAACATTTCAAATTTTCCCTTCCTCCAGAAGCTTGTCATTTCCGGGGCTAATCTTTCTGGGTTGATCTCACCTGATATTGGAAACTGCCCTGAGCTCATAACCATTGATCTTAGCTCAAATAATCTTGCTGAGCTTGGTGATTGTGCTAGTTTGAAGAACCTCAATAACAATCTTAGTGGAGTTCTTCCTGCTGAGTTGGGAAAGCTTTCAAATCTGGAGGTTATAAGAGCCGGAGGGAACAATGGCATTGTGGGGGAGATTTCAGATGCTCTTGGGAATTGCATGAATTTGACTATATTAGGTCTGGCTGACACTAAAATCTCCGGTTCATTACCTGCTTCTTTAGGTAAGTTAAGGTTGCTTCAAACGATTTCTATTTATAATACCATGTTGTCTGGTGAGATTCCTCCTGAAATAGGAAATTGCTCTGAGCTTGTCAACTTGTTTTTGTATGAGAATGAACTATTTGGTTCATTGCCAAAAGAGATGGGTAAGCTTCAAAAGCTTGAGAAAATGTTGCTGTGGCAGAATAAGTTTGCTGGAAGCATACCTCAAGAAATTGGTAGCTGTAGAAACTTGAAGATTCTTGATGTTTCTTTAAACTCTTTGTCTGGAACCATACCTGTTACTTTTGGAAACCTCTCGAATCTTGAAGAGCTTATGTTGAGTAACAATAACTTATCTGGTTCAATCCCACCCGTTCTTTCCAATCTTTCAGAGCTCATACAGCTTCAGATAGATACGAATCAAATATCAGGTTCGATTCCTGCTGAACTTGGAGAGTTGAAGAAGCTTACTGTCTTTTTCGCTTGGCAAAATAAACTTGAAGGAAACATTCCTTCTGAATTGGGTGGTTGTGCTAGCCTAGGAGCTCTTGATTTGTCATATAATGCACTCACTGATAGCTTACCTCGAAGCTTATTTCAGCTTCAAAATTTGACAAAGCTTCTGCTAATCTCTAACCATCTTTCCGGGCCTATACCCCAGGAAATTGGTAATTGTAGTTCTCTCATTCGGCTGCGTCTCTTGAACAACCAAATTGGAGAAGAGATTCCAAGAGAACTTGGTTTTCTCAGTAACTTGAACTTTCTTGATCTGTCGGAGAATAATCTTACTGGTTTAGTGCCAGTTGAGCTAGGAAATTGCAAAGAACTGCAAATGCTGAACCTAAGCAATAACTCCCTTTCTGGTGTTTTACCTACCTCTTTATCTTCACTCAAAAGGCTTGAGGTTTTTGATGTTTCTCTGAATCACTTTTCTGGTGAAATTCCAACGAGTATTGGCCAACTCACTTCACTTATTAGGCTTATCCTTGGCAGAAATTCATTCTCTGGATCAATACCCTCATCACTAGGCCTTTGTTCAAGTCTTCAACTACTGGATCTCAGCAGCAACAATCTCTCAGGAAGCATCCCATCAGAACTATTTGATATAGAAGCACTTGACATTGCTCTGAATTTGAGTTACAATGCATTATCTGGAGTAATCCCACCACAGATTTCTTCTCTGAATAAGCTCTCTGCTCTAGACATTTCCCACAACAAGCTTGAAGGAGATTTGGTGGCACTTTCAGGACTTGAAAATCTTGTTTCTCTCAACATCTCCTTCAACATGTTCACCGGCTATCTTCCGGACATCAAGTTATTCCACCAGTTGTCACCAACAGATTTGGAAGGAAATCAGGGCTTGTGTTCTAGTGGCCGAGATTCATGTTTCATTAGCGATTCTACAATGACAAAAATGCAAAATAATAGTGATTCTAAAAGGTCCGAGAGAATCAAATTGGGCATAGGATTGCTAAGTGGCTTCACCATTGCAATGGCAATCTTTGGGATTCTTACGGTGCTTCGAGCAAAGAGAATGGCTCATGAAGACAACGATTCAGAGATGGGAGGGGATTCATGGCCTTGGCAGTTCACACCATTTCAAAAATTAAACTTCTCCATCGATCAAGTCCTAAAATGTCTGGTTGACTCTAATGTGGTAGGAAAGGGATGTTCTGGGGTCGTTTATCGCGTTGAACTAGAAAACGGTGATGTCATTGCTGTGAAAAAACTGTGGCCAACAAAAATGGCTGCTAGATATGATTGCCAACAAAATGACAAGCTAGCAGCTCATGGAGGAGGAGTTCGCGATTCCTTCTCAGCCGAGGTTAAAACACTGGGCTCCATCCGACACAAGAACATCGTGAGGTTCCTCGGTTGCTGTTGGAACCGCAATACTAGGCTACTCATGTATGACTACATGCCAAATGGGAGCCTAGCAAGTTTGCTTCATGAACGAAGTGTTGGGAACTGCTTGGAGTGGGACATCAGGTATCGGATATTGCTGGGAGCAGCTCAAGGCTTGGCTTATCTTCACCATGATTGTGTTCCTCCCATTGTTCATAGGGACATCAAGGCCAACAATATTCTCATAGGTCCCAATTTTGAGCCATACATTGCCGATTTCGGGCTCGCTAAACTCGTTAATGATGGAGATTTTGCAAGATCCTCTAGCACATTGGCCGGTTCCTATGGCTACATTGCTCCTGGTTAG 2871 0.4232 MPRPRRFLSNHNNHHQMPRQQSFSLLRLPFFNLLFLLLPHLSSSLNSEAHVLLSWLHTSSSSSSSVPPSSISDWSPSNPNPCNWSFIKCSPQNLVTEINIQATELDLPFPPNISNFPFLQKLVISGANLSGLISPDIGNCPELITIDLSSNNLAELGDCASLKNLNNNLSGVLPAELGKLSNLEVIRAGGNNGIVGEISDALGNCMNLTILGLADTKISGSLPASLGKLRLLQTISIYNTMLSGEIPPEIGNCSELVNLFLYENELFGSLPKEMGKLQKLEKMLLWQNKFAGSIPQEIGSCRNLKILDVSLNSLSGTIPVTFGNLSNLEELMLSNNNLSGSIPPVLSNLSELIQLQIDTNQISGSIPAELGELKKLTVFFAWQNKLEGNIPSELGGCASLGALDLSYNALTDSLPRSLFQLQNLTKLLLISNHLSGPIPQEIGNCSSLIRLRLLNNQIGEEIPRELGFLSNLNFLDLSENNLTGLVPVELGNCKELQMLNLSNNSLSGVLPTSLSSLKRLEVFDVSLNHFSGEIPTSIGQLTSLIRLILGRNSFSGSIPSSLGLCSSLQLLDLSSNNLSGSIPSELFDIEALDIALNLSYNALSGVIPPQISSLNKLSALDISHNKLEGDLVALSGLENLVSLNISFNMFTGYLPDIKLFHQLSPTDLEGNQGLCSSGRDSCFISDSTMTKMQNNSDSKRSERIKLGIGLLSGFTIAMAIFGILTVLRAKRMAHEDNDSEMGGDSWPWQFTPFQKLNFSIDQVLKCLVDSNVVGKGCSGVVYRVELENGDVIAVKKLWPTKMAARYDCQQNDKLAAHGGGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLASLLHERSVGNCLEWDIRYRILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGPNFEPYIADFGLAKLVNDGDFARSSSTLAGSYGYIAPG 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0021 956 SUPERFAMILY L domain-like 443 676 - -
Lele41g0021 956 Gene3D Transferase(Phosphotransferase) domain 1 759 956 - -
Lele41g0021 956 SUPERFAMILY L domain-like 70 218 - -
Lele41g0021 956 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 273 381 - -
Lele41g0021 956 SMART LRR_typ_2 325 349 IPR003591 -
Lele41g0021 956 SMART LRR_typ_2 566 589 IPR003591 -
Lele41g0021 956 SMART LRR_typ_2 541 565 IPR003591 -
Lele41g0021 956 SMART LRR_typ_2 277 301 IPR003591 -
Lele41g0021 956 SMART LRR_typ_2 140 163 IPR003591 -
Lele41g0021 956 SMART LRR_typ_2 469 492 IPR003591 -
Lele41g0021 956 SMART LRR_typ_2 493 516 IPR003591 -
Lele41g0021 956 SMART LRR_typ_2 421 445 IPR003591 -
Lele41g0021 956 ProSiteProfiles Leucine-rich repeat profile. 142 163 IPR001611 GO:0005515
Lele41g0021 956 SMART serkin_6 767 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0021 956 ProSiteProfiles Leucine-rich repeat profile. 327 350 IPR001611 GO:0005515
Lele41g0021 956 ProSiteProfiles Protein kinase domain profile. 767 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0021 956 SUPERFAMILY Protein kinase-like (PK-like) 754 955 IPR011009 -
Lele41g0021 956 Pfam Protein kinase domain 770 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0021 956 Pfam Leucine rich repeat 596 649 IPR001611 GO:0005515
Lele41g0021 956 Pfam Leucine rich repeat 470 530 IPR001611 GO:0005515
Lele41g0021 956 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Lele41g0021 956 Gene3D Ribonuclease Inhibitor 44 192 IPR032675 -
Lele41g0021 956 Gene3D Ribonuclease Inhibitor 193 316 IPR032675 -
Lele41g0021 956 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 750 859 - -
Lele41g0021 956 FunFam Predicted protein 172 272 - -
Lele41g0021 956 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 461 955 - -
Lele41g0021 956 PRINTS Leucine-rich repeat signature 614 627 - -
Lele41g0021 956 PRINTS Leucine-rich repeat signature 472 485 - -
Lele41g0021 956 Gene3D Ribonuclease Inhibitor 414 511 IPR032675 -
Lele41g0021 956 Gene3D Ribonuclease Inhibitor 317 413 IPR032675 -
Lele41g0021 956 ProSitePatterns Protein kinases ATP-binding region signature. 773 796 IPR017441 GO:0005524
Lele41g0021 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 905 917 IPR008271 GO:0004672|GO:0006468
Lele41g0021 956 FunFam Os07g0541700 protein 860 949 - -
Lele41g0021 956 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 399 686 - -
Lele41g0021 956 Gene3D Ribonuclease Inhibitor 595 682 IPR032675 -
Lele41g0021 956 SUPERFAMILY RNI-like 166 505 - -
Lele41g0021 956 Gene3D Ribonuclease Inhibitor 512 594 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0021 Lele-ChrLele41 163609 166566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0021 44 955 Receptor kinase-like Gene Family AT5G56040 45.340 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele41g0021 Pkinase 1.5e-27 CL0016