Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0020 ATGGCCTTCATCAAGCTTTTCTCTCTCTATGCTTTCGTCTTCTTCTGCTGCTGCACTGTATCTCTCTCTTCTTCTTTTGCCTCATCTGACGTTGAACTTCTCTTGGGGGAAATCAAAGCATCCTTACAAGGCAACCACCCCCAAAACATCATTTTGTCTTCTTGGAACTCCTCTGTGCCTCTTTGCCAATGGAGGGGTCTCAAGTGGGTCTTCTCCAACGCCTCTTCTCTCTCGTGCTCCCATTCTTCTCCTCATTGGACCAATCTCTCACTCTTCAAAGACCCTCATCTTCATTTGCTCTTTCTTCAACTTCCTTCTGCTAATCTCTCTGGTTCCATCCCCCGAGAGCTTTCTGAGTTCCCTATGCTTCAGAGCCTCTATCTCAACTTCAACTCGTTGAATGGAGCCATTCCTCTCGAACTTGGCTATAGTTCCTCCCTCTCCGACATCGATTTGCGTGAAAACTTTCTCAGTGGAGCTTTACCTCCATCTATCTGGAATACGTGCCACAGGCTTGTTTCTCTCAGACTCGGTGGAAATTTGCTTTCTGGGTCTATAGAACCAGCATTGCCAAATTGTTCTTGCGAGAATTTGCGATTCCTTGATTTTGGCAGGAACAACTTCTCTGGGAATTTCCCATATTTCATTACTCGTTTTGGCGGGTTGAAACAACTTGACTTGGGTGATAATATGTTGGTAGGTTCGATTCCTCAGACCTTAGAGGGGCTAAGGCTTGAGAATTTGAACCTCTCCCACAACAATTTTAGCGGGGTTTTGCCTACTTTTCTGGAAACCAAGTTTGGTCTGGAGGTTTTTGAAGGGAATAACCCAGCCTTATGTGGGCCACCCTTGAGAAGTTGTGGTGGAAATTCTAAGTCTAGACTAAGTGCCGGTGCTATCGCCGGCATAGTGATCAGTCTGATGGCTGGGAGTGTGGTTTTAGCTTCTTTGCTTATAGGTTATGTGCAAAACAAGAGGAGGAAGAGCAGGGGAGAGAGTGACGATGAATTGGAGGAAGAAGAGGATGAGGAAAATGGTGTTAATAGTAATGGTGAGGGCAAGCTTATGTTATTTCAAGGTGGCGAGAATTTGACGTTAGAAGATGTGTTGAATGCAAATGGGCAAGTTCTGGAGAAGACATGTTATGGGACTGTGTATAAAGCAAAGCTTGCTGATGGAGGGACCATTGCGTTGAGGTTGTTGAGAGAAGGTTGCTGCAGGGACAGGACTTCGAGCTTGCCGGTTATAAAGCAACTGGCAAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAAGGAAAAAGAGGCGAGAAGCTCCTTATTTTTGATTATCTACCTCTTACAACCCTTCATGATCTTCTACATGAAACTAAAGCAGGAAAACCAGTGCTGAACTGGTCTAGGCGACACAAGATTGCATTGGGTGTAGCCAGAGGGCTTGCATATATTCACACAGGACTTGATTCTCCAATTACTCATGGAAGTGTGAGATCAAAGAACATTGTTGTGGACGATTTCTTTGTTGCCAGGCTCGCTGAGTTTGGGATTGATAAGCTATTGGTTTCAGCAGTAGCAGATGAGATGGTGGCACTTGCTAAGTCCGAGGGCTATAAGGCTCCGGAGCTTCAAAGGATGAATAAATGTAATTCAAGAAGTGATATTTATGCATTTGGAATATTACTGTTGGAGATTTTGATCGGGAAGAAACCCGGAAAAAGTGGTAGAGGAAGCGAGTATGTGGATCTGCCTTCAATGGTGAAAGTGGCAGTTTTGGAGGAGAAAACAATGGAGGTGTTTGTTGTGGAGATTTTGAAAGGGATAAGAAGTCCGATGGAAGAAGGGTTGGTTCAGGCATTGAAGCTAGCAATGGGTTGTTGTGCCCCTGTGGCTTCAGTTAGACCCCCCATGGATGAAGTTGTGAGGCAGTTGGAGGAGAACAGACCAAGAAACAGGTCTGCTTTATACAGCCCCACAGAAACTAGAAGTGGAAGTGGTACCCCATTTTGA 2016 0.4494 MAFIKLFSLYAFVFFCCCTVSLSSSFASSDVELLLGEIKASLQGNHPQNIILSSWNSSVPLCQWRGLKWVFSNASSLSCSHSSPHWTNLSLFKDPHLHLLFLQLPSANLSGSIPRELSEFPMLQSLYLNFNSLNGAIPLELGYSSSLSDIDLRENFLSGALPPSIWNTCHRLVSLRLGGNLLSGSIEPALPNCSCENLRFLDFGRNNFSGNFPYFITRFGGLKQLDLGDNMLVGSIPQTLEGLRLENLNLSHNNFSGVLPTFLETKFGLEVFEGNNPALCGPPLRSCGGNSKSRLSAGAIAGIVISLMAGSVVLASLLIGYVQNKRRKSRGESDDELEEEEDEENGVNSNGEGKLMLFQGGENLTLEDVLNANGQVLEKTCYGTVYKAKLADGGTIALRLLREGCCRDRTSSLPVIKQLAKIRHENLIPLRAFYQGKRGEKLLIFDYLPLTTLHDLLHETKAGKPVLNWSRRHKIALGVARGLAYIHTGLDSPITHGSVRSKNIVVDDFFVARLAEFGIDKLLVSAVADEMVALAKSEGYKAPELQRMNKCNSRSDIYAFGILLLEILIGKKPGKSGRGSEYVDLPSMVKVAVLEEKTMEVFVVEILKGIRSPMEEGLVQALKLAMGCCAPVASVRPPMDEVVRQLEENRPRNRSALYSPTETRSGSGTPF 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0020 671 MobiDBLite consensus disorder prediction 652 671 - -
Lele41g0020 671 Gene3D Ribonuclease Inhibitor 32 168 IPR032675 -
Lele41g0020 671 Gene3D Phosphorylase Kinase; domain 1 363 447 - -
Lele41g0020 671 ProSiteProfiles Protein kinase domain profile. 371 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0020 671 Gene3D Ribonuclease Inhibitor 169 289 IPR032675 -
Lele41g0020 671 Gene3D Transferase(Phosphotransferase) domain 1 450 659 - -
Lele41g0020 671 Pfam Protein tyrosine and serine/threonine kinase 374 646 IPR001245 GO:0004672|GO:0006468
Lele41g0020 671 SUPERFAMILY Protein kinase-like (PK-like) 375 647 IPR011009 -
Lele41g0020 671 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 99 648 - -
Lele41g0020 671 MobiDBLite consensus disorder prediction 650 671 - -
Lele41g0020 671 SUPERFAMILY L domain-like 58 285 - -
Lele41g0020 671 FunFam Leucine-rich repeat receptor-like protein kinase 195 287 - -
Lele41g0020 671 MobiDBLite consensus disorder prediction 329 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0020 Lele-ChrLele41 157930 160549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0020 1 671 Receptor kinase-like Gene Family AT3G24660 69.333 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele41g0020 PK_Tyr_Ser-Thr 1.3e-24 CL0016