Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0016 ATGGAACTAAATAAGCCGGCAATTTTGTTTGTTGCCAACCCCGGGGGGGCTCCAGCTGTGTTTACTCAACACATACATGCAGAATCAGCCAGTGGTGTTTTAAAAACAGGACAGGATGTACAGAATAACATCTCCATACAGCCAGGGAAAGAACTTTCTGCAGAGTTTGGTCATGAAGGAATTGCTGGTAGAAGAGAAACTGCTGCACCTGATTCACTCCTAAAGCATGAAGGTAGGTTTGGATTTCATGGGGAGAACGGCCAAGTGAGATATGAAGATCTTACTAGTATTCTGGGATTGAAGAAAATGGACTCTGAGAATCCTTTTGAAATTGCTGATCCTAACTTCACAAGAGTGCCAACTCAAGAGATAGAAAATGGGACTTTTGTTGATAAAAATAGCAAAAATCAAAAGGAAGATGGTAATGTTACACAAGGAGTGAGGAAGACTCTTGGGGAATCAGTTGGTGACCAAGCTGATACAGGAACACCTGGCTCTCCCTTTCTCAGAAAAGAATCCTCCAATTCCAATGAAGTTTCTGGTTTAGGAGTTTCAGATGATTCTCAATCTGGAATAATTAAGTTACTATGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGTGATGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAAGGATATATCGTGGCAAGGGCTTGTTAAGAAGACCTTGGGTATTTCCAATCAACCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTCTCCTCTGATGAGGATCTTCAAAATATGATAGAAGAATACCAAGGGCCTGAAAGGCACAAGGGATCTCAAAGACTTCGAATTTTCTTAATGCCCTTGAGTGAATCTGAAAAGGAATTGTCAAGAACTGATCAACAGAGTAATCCTGATTACCAATATGTTGTTGCTTTGAATGGCATAGGGGATTGTTGTCCAAGAATATATAGTTCAGGGCAGAGCTTGACAAATGAAGTTGGTCCGTTAGGGGCAAATTTGAATTTTTCTCCAGACTTTCAGAAAAAAATTCCAAATGCACCGTTTTCTTCGGAGATCAAGGGTGGTGGTAGTGCTATACATCCAAATGAAATTTTTAATGATTCTCAGAATCTGCAGGGAACTTCCAATCAATATCAACAGATTTCTTTTACTCCATTTCAAGGAGGAAATTTGAGCACAGTTTATACACAGTCTCAAGGTTATAGCTCATGCCAGGGAAGTGCTGCAAGTAGCTTATCCTTTATTACTGCCCAAGTATCACCTGAGACATCCAATGTAAGTGCTGCTGATAGCAGATACTCCCATCAAATGGCTACGACTTTCCTGAGTGACAATCACCCCTCCCAACAAGCTGATGTTGGTCTGCCAGAGCAGTACCATGGGAAGCTGTTCAGAAATAATCCTGGCAAGGAATTTATAACTGCTTTGTATGCTAATCGAAGTGACGGTTATAATGATGAAATTTTGGGGGAAAGGTCCATGCATCAATCAGGAAATTCTCTTTCTAGCCTGGGTGAGTCAGTTTGTCCACAGTCTGGATCTAATTGTATTCCTGATTCTCTACATTGCATGCCTCATGCATTTTCTGATTCAAAGTTGCATGAGAATGGATTAAAGTCTGGTTACTGCTCTCAAGAAGGGATTGGTCAATTTTCCTCATTGAACCTTTCAATGGCTCAGTTGTCTTCAATGGTACCCTCAAGTGTTTCACAAAGGGATCCTATGGAAATCCAGCATGATCCCCTTTTCATTTATCCACAAATACAAAGTAAGATACCAAATGTTCAGCGGGGTGAGTTGCAGAGAAGGCAGGATTTTCCGTTTTCTTTCCCATCTGAAGTATGTTTAGGAGTGGACGATCCTATTCAGAAGGATAACATTTTATACAGTAAGAGCAATCCTTTAGCTCAAACTGATTTAACTGCATCTACCTTTATAGAGCAGCAGTGTGGGGACAATACTGTGAATATAGAAATCATGAAGAGAATTGAAGACAAAAATTCTCTTCAGAGTAAGGATAGCAATCTTCATGAGAGGGAATCACCTGCCATTGCTGTAGAGCATGTGAATGAATTGCATCTCCTGGACTCTTCTCCACCTTCTAATTTAAACATTAAGATTAATAAACAAAATCAGTTGGAGCAATCTTCTGACGGTATGATTTCTACATCCTCTTGCATGACAGGAATTTCCCAAAATAATCTGATTGAGAAGACCCCATCTGATTTTCTTGACATAAGCCACAAGTCTATTGGTGGAAGAGAATGTTGTTTAACTGAGGGTTTGAATGGTGAGCTAGGATTTGATTTTTCTTGGACTAGAAAATCTGGGTTTAATGCTTCATCCCTAAAACGTGAAGGAAACTCTTGTGGTAAAACTTCTCTAATCGATTATTTGTTCGAGCTGTCCATGGACCCGGTTTCTCATAAACAGGCGCAAGGTCAACCTTTTCAGAAGGATACAGATCTCTATGGAAATCCGACAGTAAGCTCAGATTTTTTGTATTCATCAGTACTTCATGATGACCCTGGTCCAAGTTCAAATTTGCCTGTGAATGAACTACAGAACTCAAGCAAGAATATTGTGTTTAAAAGAGTATCTTCTCTCATTGATGATGACCTTGTAGCTAGTTCTAGTCGAATGGTTGATCAGTATAGTTGTGGAACTCTTGCCAATGAAACAAAAGTTGAAGATATCATGTTGGAGCAATCAAATTTTTTTGAAAAGTGTGACAATTCAAATAAAGTTGAGCCACTTATTACTATAGAAGATGTGACTGATGTTGTTCCTCCAAGCGTTGAGTCTTCATTGGTGCCCAACCCTCATATAGTGGTAGAAATTGGAAATGATGTTTTATCCCCATCTGCAACAGAGTTGGAGAGCACTATTCCGGATTCTGAACTTGAGGATTTTAAGGATGACGAAGAAGACAAGAATGAATCCCTTACGGATGCAATGATAGCAGAAATGGAAGCCAGCATCTATGGCTTGCAGGTTGTCCATCATTGA 3048 0.3999 MELNKPAILFVANPGGAPAVFTQHIHAESASGVLKTGQDVQNNISIQPGKELSAEFGHEGIAGRRETAAPDSLLKHEGRFGFHGENGQVRYEDLTSILGLKKMDSENPFEIADPNFTRVPTQEIENGTFVDKNSKNQKEDGNVTQGVRKTLGESVGDQADTGTPGSPFLRKESSNSNEVSGLGVSDDSQSGIIKLLCSFGGKVLPRPSDGKLRYVGGETRIISIRKDISWQGLVKKTLGISNQPHTIKYQLPGEDLDSLISVSSDEDLQNMIEEYQGPERHKGSQRLRIFLMPLSESEKELSRTDQQSNPDYQYVVALNGIGDCCPRIYSSGQSLTNEVGPLGANLNFSPDFQKKIPNAPFSSEIKGGGSAIHPNEIFNDSQNLQGTSNQYQQISFTPFQGGNLSTVYTQSQGYSSCQGSAASSLSFITAQVSPETSNVSAADSRYSHQMATTFLSDNHPSQQADVGLPEQYHGKLFRNNPGKEFITALYANRSDGYNDEILGERSMHQSGNSLSSLGESVCPQSGSNCIPDSLHCMPHAFSDSKLHENGLKSGYCSQEGIGQFSSLNLSMAQLSSMVPSSVSQRDPMEIQHDPLFIYPQIQSKIPNVQRGELQRRQDFPFSFPSEVCLGVDDPIQKDNILYSKSNPLAQTDLTASTFIEQQCGDNTVNIEIMKRIEDKNSLQSKDSNLHERESPAIAVEHVNELHLLDSSPPSNLNIKINKQNQLEQSSDGMISTSSCMTGISQNNLIEKTPSDFLDISHKSIGGRECCLTEGLNGELGFDFSWTRKSGFNASSLKREGNSCGKTSLIDYLFELSMDPVSHKQAQGQPFQKDTDLYGNPTVSSDFLYSSVLHDDPGPSSNLPVNELQNSSKNIVFKRVSSLIDDDLVASSSRMVDQYSCGTLANETKVEDIMLEQSNFFEKCDNSNKVEPLITIEDVTDVVPPSVESSLVPNPHIVVEIGNDVLSPSATELESTIPDSELEDFKDDEEDKNESLTDAMIAEMEASIYGLQVVHH 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0016 1015 PANTHER OS05G0427100 PROTEIN-RELATED 187 502 - -
Lele41g0016 1015 Pfam PB1 domain 209 291 IPR000270 GO:0005515
Lele41g0016 1015 Gene3D - 211 293 - -
Lele41g0016 1015 SUPERFAMILY CAD & PB1 domains 208 295 - -
Lele41g0016 1015 SMART PB1_new 207 294 IPR000270 GO:0005515
Lele41g0016 1015 CDD PB1_UP2 196 292 - -
Lele41g0016 1015 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Lele41g0016 1015 MobiDBLite consensus disorder prediction 150 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0016 Lele-ChrLele41 123213 126336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0016 18 373 MAP Kinase Kinase Kinase AT1G04700 37.468 5.99e-49 186