Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele41g0015 | ATGTTTCTAACCTCTGCAAAAATTGAGGAAGATATAATTTTTCTCGACATGTGTATCTTCTTCTTGTACTGGAGCTTTGTTGTAATTCAAAATGCTGATCTGGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGAGGGGAACGGATGTTGCCATAAAGAGAATTAAAAAGAGCTGCTTTTCAGGAAGATCTTCTGAGCAACAACGATTGATATGCAAAATTCAACAAAAGACTTCTGGAGAGAGGCACAAATCCTTTCAAATCTTCACCACCCCAATGTGGTTGCGTTTTATGGGGTTGTACCAGATGGAGCTGGAGGAACCTTGGCAACTGTTACTTGATCGTCGTAAAAGGCTTATAATTGCCATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTGAGGGATCCACAACGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAACACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAATGGCAGTAGCAACCGGGTTTCTGAGAAGGTTGATGTTTTCTCATTCGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAGCCTTATGCAGATATGCATTGTGGCGCTATTATTGCTGTAACTGAATTTCGTATTGTTGTCCTTTGCTCTGAAACGACTTTATATAGGAAGCTTAATGGACAAAACAAACTAACGGAAAAGCAACACATGCATTCTCTGACTTGCATTATTGATTTGCTTCCTGCTTGGCAACATATGATTTTAGGGGGCATTGTAAAGAATACTCTTCGACCACCAATTCCGCCACGTTGTGACCCTGAATGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGACCCCGATACCCGACCGTCTTTTACTGAGATAACTAGTCGCCATTATGATCGACTTCTGCTTGAGCATGCTTTTGGTTTGCTAGGTATTCTCTGA | 1050 | 0.4152 | MFLTSAKIEEDIIFLDMCIFFLYWSFVVIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKKSCFSGRSSEQQRLICKIQQKTSGERHKSFQIFTTPMWLRFMGLYQMELEEPWQLLLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIAVTEFRIVVLCSETTLYRKLNGQNKLTEKQHMHSLTCIIDLLPAWQHMILGGIVKNTLRPPIPPRCDPEWRKLMEECWSPDPDTRPSFTEITSRHYDRLLLEHAFGLLGIL | 349 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele41g0015 | 349 | Pfam | Protein kinase domain | 35 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele41g0015 | 349 | PIRSF | ILK | 283 | 338 | - | - | |
| Lele41g0015 | 349 | PIRSF | ILK | 25 | 82 | - | - | |
| Lele41g0015 | 349 | PIRSF | ILK | 99 | 244 | - | - | |
| Lele41g0015 | 349 | Gene3D | Phosphorylase Kinase; domain 1 | 22 | 92 | - | - | |
| Lele41g0015 | 349 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 331 | IPR011009 | - | |
| Lele41g0015 | 349 | ProSiteProfiles | Protein kinase domain profile. | 34 | 344 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele41g0015 | 349 | ProSitePatterns | Protein kinases ATP-binding region signature. | 40 | 65 | IPR017441 | GO:0005524 | |
| Lele41g0015 | 349 | Gene3D | Transferase(Phosphotransferase) domain 1 | 119 | 340 | - | - | |
| Lele41g0015 | 349 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele41g0015 | 349 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 30 | 332 | - | - | |
| Lele41g0015 | 349 | SMART | serkin_6 | 34 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele41g0015 | Lele-ChrLele41 | 113394 | 116906 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele41g0015 | 28 | 332 | MAP Kinase Kinase Kinase | AT1G16270 | 57.492 | 8.66e-115 | 357 |
Transcription factors information