Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1239 ATGAACGACGCAGATGTTTCAAAGCAAATCCAGCAGATGATCAGATTCATCCGCCAAGAGGCTGAGGAGAAAGCCAACGAGATCTCCGTCGCTGCCGAAGAGGAATTCAACATCGAGAAACTTCAATTACTTGAAGCTGAGAAGAGAAGGATCAGGCAAGAATATGAACGGAAAGCCAAACAGGTTGACATTCGCAAAAAAATTGAATACTCGATGCAGCTGAATGCATCGCGTATAAAAGTACTTGAAGCACAAGATCAAGTGGTGAATTCAATAAAGGAATCTGCTAGCATGGAGCTTTCGCGGATCTCTGATGATAAGAAAGTGTACAAAAATCTGATGAAAGCGTTGATTGTCCAGGGTCTGGTGAGGCTTAGGGAACCGGCAGTGATACTGCGGTGCAGGGAGGTTGATCGGAAGCTGGTGGAGTCTGTGGTGGATGAAGCCAAAAAGGAATATTCAGAGAAAGCGAAAGTGCAGGCGCCAAAGATCATGATCGATGAACGAGTTTATCTGCCTTCAGCTCCCAAATCTGGCAACTCGCACGAACCTTTCTGCTCCGGAGGAATAGTATTGGCATCGGAGGATGGGAAGATCGTGTTGGAGAACACTCTTGACGCAAGGCTTGATGTCATTTTCCGCCACAAACTCCCTCAGGTATATCTTTTCGATCCCTTCCATTTTATTCAAACGCAGTTATACATTATCGGGCTAAGAAATCCGGAAGCGCATTTTAGGTTGAAGAGAGCATGCATGGGAATTTGA 765 0.4549 MNDADVSKQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRRIRQEYERKAKQVDIRKKIEYSMQLNASRIKVLEAQDQVVNSIKESASMELSRISDDKKVYKNLMKALIVQGLVRLREPAVILRCREVDRKLVESVVDEAKKEYSEKAKVQAPKIMIDERVYLPSAPKSGNSHEPFCSGGIVLASEDGKIVLENTLDARLDVIFRHKLPQVYLFDPFHFIQTQLYIIGLRNPEAHFRLKRACMGI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1239 254 SUPERFAMILY V-type ATPase subunit E-like 88 221 - -
Lele40g1239 254 Gene3D - 1 62 - -
Lele40g1239 254 Coils Coil 7 34 - -
Lele40g1239 254 Hamap V-type proton ATPase subunit E [atpE]. 8 224 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lele40g1239 254 Pfam ATP synthase (E/31 kDa) subunit 16 220 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lele40g1239 254 Coils Coil 38 61 - -
Lele40g1239 254 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 220 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lele40g1239 254 Gene3D - 91 227 IPR038495 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1239 Lele-ChrLele40 22149846 22151353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1239 1 220 Primary Pumps ATPases(2) AT3G08560 68.919 2.73e-109 313