Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1238 ATGGAAGGAGGAGGTATGTTGTTGGGCAAAATGGGGAAGCTGAAGAATTGGGGGGAGGAGGAGGACGGGTACTGCCTGAGCTGGAGGATGGCGGTGGAGATGAACAACGCGGGGCTGTGGAGGAGGGTGCCGGAGCGGTGCTACAGACACGTGGAGAGGTACATGACGGAGGGGCAGTACCGGCAGGATGTGGAGATGATAAAAGAGCAGATACTGGAATATGTGAAGGGCATAGAGGTGGGAGCGGCAGGCAAGGACGGGTGGGTCATGGACGTGGACGACACCTGCATCTCCAACGTCGGCTATTACAAACACCATGCTTTTGGCTGCGAGGCCTTTGATTCCGCCAAGTTCAAGCAGTGGATCATGAAGGCCGAGTGTGACGCCATCCCGCCCATGTTGGTGCTCTTCCGGGAGCTGCTCCACCGAGGATTCAAGGTCTTCCTCATCACCGGCAGAGACAGTGCCCGCATGGCCCGCATCACCTCTCTCAACTTGCATCGCCAAGGATTCGTCGGCTACCACCGTCTTCTTCTTAGGAGTGAAGAGCACAAGGGGGAAAGTGCGGCGAAATACAAGTCAGAGATGAGAAGGAAGATAGAAGGAGAAGGATATAAAATATGGGGCAACGTGGGAGACCAGTGGAGTGATCTCCAGGGTTACTCTTTGGGGCGTCGTACTTTCAAACTCCCCAATCCCATGTATTGCATCCCTTAA 717 0.5509 MEGGGMLLGKMGKLKNWGEEEDGYCLSWRMAVEMNNAGLWRRVPERCYRHVERYMTEGQYRQDVEMIKEQILEYVKGIEVGAAGKDGWVMDVDDTCISNVGYYKHHAFGCEAFDSAKFKQWIMKAECDAIPPMLVLFRELLHRGFKVFLITGRDSARMARITSLNLHRQGFVGYHRLLLRSEEHKGESAAKYKSEMRRKIEGEGYKIWGNVGDQWSDLQGYSLGRRTFKLPNPMYCIP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1238 238 TIGRFAM plant-AP: plant acid phosphatase 19 237 IPR010028 GO:0003993
Lele40g1238 238 CDD HAD_VSP 51 237 - -
Lele40g1238 238 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 19 237 - -
Lele40g1238 238 Gene3D - 21 238 IPR023214 -
Lele40g1238 238 SUPERFAMILY HAD-like 82 235 IPR036412 -
Lele40g1238 238 PIRSF VSP 7 238 IPR014403 -
Lele40g1238 238 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 22 236 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1238 Lele-ChrLele40 22147559 22148834 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g1238 40 22147559 22148834 Lele41g0295 41 2409992 2410579 CCT
Lele40g1238 40 22147559 22148834 Lele42g0290 42 2464978 2465562 CCT
Lele40g1238 40 22147559 22148834 Lele43g1075 43 19212805 19213392 CCT
Lele40g1238 40 22147559 22148834 Lele44g1059 44 19303179 19303763 CCT
Lele37g1415 37 22857302 22860447 Lele40g1238 40 22147559 22148834 hybridization
Lele38g1290 38 23644873 23648508 Lele40g1238 40 22147559 22148834 hybridization