Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1231 ATGGGGAATCTTCGGTCGGATCGTAAAAAGGCAATCCAGGAACTGGAGAGAGGCCGTGAGTTTGCCACCCAGCTTCAGCAGCTCGTTCTGAACTCCAGCAGCGAAGGAGATGGCGAGGGAACGACGCCGTCTGCCCACGATCTTGCGGAAGGGGTGTTGACCTCCTTTTCCAACACCCTTTTGCTCTTGAATCTCCCCTCTCGCGATTCCCAGATGCAACAATATTGTTCTTATTTTCTTCCCGCTAAATCTGACGACTCTGCAGATAGTTGCAAGAGCACTTCCGCCTTTAAGGAACGAAGAGGCTCTTATAAGAGAAGGAGAATATCACAAACATCGGAGATAGACTCCGAAACTCTGATTGATGATGGCCACGCGTGGAGAAAGTATGGTCAAAAGAATATAATGAACGCCGCATACCCAAGGAACTACTTCAGGTGCAGTCACAGGTTTGACCAGGGATGCCAAGCAACCAAACAGGTGCAGAGAATTCAAGAGAAGCCTGAGCTGTACAGGACAACTTACTATGGCAATCATACCTGCAACAGAAACTCGTTGAACAACGATATCATTTTGGATGCTAATTCTCCTTCTCACCCTTCCATATTAATCAGTTTTGACAATAACCTCCCTACCGAACAAGCCTTCTTCTCACCATCCCCATCATCATCTCTTCCCATGACCAAAACACAGTGTAAGGAAGAGATTCCCTCATCTTCATCGGAGGGTTACCTTCTCTCCCCTGAATCAGACCACAAGGATCCCATTTCTGATATGTTCTACGGTGATCTCGTCTTTGAGCACTTTGATTTTTGA 816 0.4694 MGNLRSDRKKAIQELERGREFATQLQQLVLNSSSEGDGEGTTPSAHDLAEGVLTSFSNTLLLLNLPSRDSQMQQYCSYFLPAKSDDSADSCKSTSAFKERRGSYKRRRISQTSEIDSETLIDDGHAWRKYGQKNIMNAAYPRNYFRCSHRFDQGCQATKQVQRIQEKPELYRTTYYGNHTCNRNSLNNDIILDANSPSHPSILISFDNNLPTEQAFFSPSPSSSLPMTKTQCKEEIPSSSSEGYLLSPESDHKDPISDMFYGDLVFEHFDF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1231 271 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g1231 271 SUPERFAMILY WRKY DNA-binding domain 118 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele40g1231 271 Gene3D WRKY domain 106 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele40g1231 271 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 201 IPR044810 GO:0003700
Lele40g1231 271 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g1231 271 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1231 Lele-ChrLele40 22114025 22115380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1231 1 206 WRKY Transcription Factor Family AT3G56400 36.000 1.05e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele40g1231 WRKY 3.1e-24 CL0274