Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1224 ATGAGTTACAGCGACAGGAACAGAGGAACAAAAGAGAGGGAATGTGAAGAGTTGATCTTGCAGAATTCTGGGGAATTAGAGTCCAAACCGGTTGGGCAGAATGGATCGATTACAACCCCACCGCTAACAATCGATGAGAATCTTCTGGTTGACCCTAAACAACTCTTCATTGGGTCAAAAATCGGTGAAGGAGCTCATGGGAAGGTTTATGAAGGAAGGTATGGAGATCAAATTGTTGCAATTAAGGTTCTGCATCGTGGGAGCACTTCAGAAGAAAGAGCAGCCCTTGAAAATCGTTTTGCTAGGGAGGTTAATATGATGTCCCGTGTCCATCATGAGAATCTGGTTAAGTTTATTGGAGCTTGCAAGGATCCTCTGATGGTTATAGTCACGGAGCTTTTACCCGGGATGTCGCTGAGAAAATATTTGACAAGCATACGCCCTGGACTATTAAACTGTCAGGTGGCCATAAACTTTGCCCTTGATGTTGCTCGTGCCATGGATTGCCTACACGCTAATGGGATCATACATAGAGATTTGAAACCTGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTCACTGAAATGATGACTGCAGAAACTGGAACTTACCGTTGGATGGCTCCAGAGCTGTACAGTACCGTGACATTACGTCAGGGAGAGAAAAAACACTACAACAACAAGGTTGATGTGTACAGCTTTGGGATTGTTTTGTGGGAACTTTTAACGAATCGCATGCCTTTTGAAGGGATGTCTAATTTACAAGCTGCTTATGCCGCTGCGTTTAAGCATGAGAGGCCTAGCCTTCCAGAAGATATACCTCCTGATCTGGCCTTTATCATTCAATCATGCTGGGTTGAGGATCCGAACTTGAGACCGAGCTTTAGTCAGATCATCCGTATGCTTAACGCCTTTCTCTTCACTTTGTCGCCTGCGCCACCCTCCCCTAGTTCGCAGGAACCTGAAAATGTTGAACCTGAAGCTTCAGCAACTACAAGTAATGGCGCGATAACCGAGTTTTCTGCCCGAAACAGAGGAAAGTTTGGATTTCTTCGCCATTTGTTCACTTCGAAAAGGACCAAAAACTAA 1131 0.4447 MSYSDRNRGTKERECEELILQNSGELESKPVGQNGSITTPPLTIDENLLVDPKQLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERAALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPGLLNCQVAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKHERPSLPEDIPPDLAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPAPPSPSSQEPENVEPEASATTSNGAITEFSARNRGKFGFLRHLFTSKRTKN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1224 376 SUPERFAMILY Protein kinase-like (PK-like) 47 337 IPR011009 -
Lele40g1224 376 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Lele40g1224 376 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Lele40g1224 376 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Lele40g1224 376 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Lele40g1224 376 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Lele40g1224 376 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1224 376 Gene3D Phosphorylase Kinase; domain 1 44 134 - -
Lele40g1224 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Lele40g1224 376 MobiDBLite consensus disorder prediction 327 352 - -
Lele40g1224 376 MobiDBLite consensus disorder prediction 335 352 - -
Lele40g1224 376 Gene3D Transferase(Phosphotransferase) domain 1 138 351 - -
Lele40g1224 376 FunFam Kinase suppressor of Ras 1 44 134 - -
Lele40g1224 376 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Lele40g1224 376 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1224 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 52 318 - -
Lele40g1224 376 CDD STKc_MAP3K-like 61 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1224 Lele-ChrLele40 22062131 22065428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1224 43 376 MAP Kinase Kinase Kinase AT5G01850 73.464 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele40g1224 PK_Tyr_Ser-Thr 6.1e-60 CL0016