Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1222 ATGAGGGACACATACGACGTTGCCCTTGAAGAAGACGCGGAGTCGTCCACGACCGTTGGAGATGCTCCCTCGGGGGTCGTTTTGCTCGGGAAATACGAGTTAAAAAGTCTGTTAGGCGTGGGAGCCTCTGGCAAGGTGTATCAGGCCACGAATGTGAATACGGGAGAGAGCGTGGCGATCAAAGCCATGAGCAAGCAGGAAGTTTTCAGAGGAGGTCTCACGGCCCATGTTGAGAGGGAAATCTCCATCATGCGCCGCCTGCACCATCCCCACACCCTCAAGCTCTTCGAAGTCCTCGCTTCCAAGACTAAAATTTACTTCGTCCTCGAACTGGCCAAGGGCGGCGAGCTCTTTCACGAGGTCGCTAAGGGCCGATTCTCCGAGGATCTCAGCCGTCGCTATTTTCACCAACTAATTTCCGCCGTCCGATACGTCCACTCCGCCGGCGTGTTCCACCGCGACCTCAAGCTCGACAACCTCTTGATAGACGAAAATATGGGCCTCAAGGTTTCGGACTTCGGATTGAGCGCTCTGAAGGACCACGTCAGCCGAGACGGCTTACTGCACACCGTTTGCGGCACACCGGCTTACGTGGCGCCGGAGATGCTCGCCAAGAAAGGCTACGAGGGGGCGAAGGTGGACGTGTGGTCGTGCGGAGTCATCCTGTTCGTCCTCACCGCCGGTTACCTTCCCTTCAACGACCACAGTCTGGCTGCCATGTACAGGAAAATCTACCGGGGACAATTCCGGTTCCCGAGGTGGACGTCGCCGGAGCTCCGGGGTCTCCTGTCCAGGTTGCTGGACAAGAATCCCGAGACGAGGATCACGGTGGAGGAGATCATCCGAGACCCATGGTTCAGCAAAGGGTATCAGGAGGTCCGGGTGCAGCACAAGGAATTCGAAGCGGATCAGCAGAGTCGACGCGGGGGACTGAACGCCTTCGATCTGATATCGTTTTCGTCAGGGTTGGATATGTCGGGGCTGTTCAGGGAGTCGGGAGCTTGGTACAGCGTGGAACGCATCGTTTCAGGGGAGAAGCCGGCGAAGATAATGGAGAAGGTGGAAGGAGTGGCGAGAGCAGAGGGAGTGAGGGTGAGGGAGAGGGAGAATGAGGGGGGAGGGAGGCTGGAGGGTCAAGATGGGAATTTAGTGATAGTGGTGGGCATATACGGGCTAACGGAGGGACTGGTAGTGGTGGAGGCCAAAAGAAGAGAGAGGAGAGTGGGAAATGGGGAAGGGGGGGAATTTTGGGAGGAGAAATTGAAGCCGGAGCTGGAGAGGTTAGCGTATAAAGCAGGGGAGAAGAAATGA 1311 0.5683 MRDTYDVALEEDAESSTTVGDAPSGVVLLGKYELKSLLGVGASGKVYQATNVNTGESVAIKAMSKQEVFRGGLTAHVEREISIMRRLHHPHTLKLFEVLASKTKIYFVLELAKGGELFHEVAKGRFSEDLSRRYFHQLISAVRYVHSAGVFHRDLKLDNLLIDENMGLKVSDFGLSALKDHVSRDGLLHTVCGTPAYVAPEMLAKKGYEGAKVDVWSCGVILFVLTAGYLPFNDHSLAAMYRKIYRGQFRFPRWTSPELRGLLSRLLDKNPETRITVEEIIRDPWFSKGYQEVRVQHKEFEADQQSRRGGLNAFDLISFSSGLDMSGLFRESGAWYSVERIVSGEKPAKIMEKVEGVARAEGVRVRERENEGGGRLEGQDGNLVIVVGIYGLTEGLVVVEAKRRERRVGNGEGGEFWEEKLKPELERLAYKAGEKK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1222 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 25 403 - -
Lele40g1222 436 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1222 436 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Lele40g1222 436 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1222 436 CDD CIPK_C 312 425 - -
Lele40g1222 436 FunFam Aurora kinase A 26 115 - -
Lele40g1222 436 Gene3D Transferase(Phosphotransferase) domain 1 26 312 - -
Lele40g1222 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Lele40g1222 436 Pfam NAF domain 311 366 IPR004041 GO:0007165
Lele40g1222 436 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1222 436 Gene3D Kinase associated domain 1, KA1 313 431 - -
Lele40g1222 436 FunFam Maternal embryonic leucine zipper kinase 26 303 - -
Lele40g1222 436 SUPERFAMILY Protein kinase-like (PK-like) 22 296 IPR011009 -
Lele40g1222 436 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1222 Lele-ChrLele40 22037624 22038934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1222 14 429 CBL-interacting serine-threonine protein kinases AT2G30360 54.801 9.07e-158 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele40g1222 Pkinase 1.4e-67 CL0016