Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1218 ATGAACTTGTCCAACTTCAAGCTCAGCTTCTGCCTGTTCTTGTTACTATGCGTTAATAATGGGATGGTTTCAGCTGATGAATTATCCTCTACTTATTATGCATTCACATGCCCTGCTGCTCTCCTCTCCATCAAAGCTGCTGTTCTGGGCGCTGTGCTCAAAGAGCCACGCATGGGAGCTTCCTTGCTTCGCCTCCATTTCCACGACTGCTTCGTCCAAGGATGTGATGCGTCGATATTGCTGGACGACACAGCGAATTTCACAGGTGAAAAAACTGCTTTTCCCAACGTGAATTCCGTGAGGGGTTACGAGGTTATAGACAAAATCAAATCTGCTTTGGAGTCCATGTGTCCTGGTGTTGTCTCCTGTGCTGACATTGTTGCTGTTGCTGCCAGAGACTCTGTGGTTTCACTGGGAGGACCGTCGTGGGAAGTGAAATTGGGGAGAAAAGACTCAACCAATGCAAGTTTAAATGATGCTAACAAGGATTTGCCAGCTCCCTTTCTGGATCTCAGTGGCCTCATCACTGCTTTCTCCACAAAGGGATTCACAGCCCAAGAAATGGTCGCTTTGTCAGGATCGCACACAATAGGGCAAGCCAAGTGCTCAACTTTCAGGACAAGGGCTTACAACGACACCAACATAGACCCTTCGTTTGCAGCGTCACTAAGAGCAAGATGTCCAAGCACAGGTGGCGATGGCAATTTGTCGCCTTTTGATTTCACCACTCCCAACTTTTTCGATAACTCTTACTTCAGGAATCTGGTGAACAAGAAGGGTCTCTTGCACTCAGACCAAGCACTCTTCAATGGAGGCTCCTCAGATTCCTTAGTCACAACTTACGTCTCCGAGCCTTGGCGTTTCAGAGCAGACTTTGCTAACGCCATGATTAAGATGAGTCAACTTAGCCCACTCACTGGTTCCAATGGCCAGATCAGGAGAAATTGCCGCAAACTCAATTGA 963 0.4766 MNLSNFKLSFCLFLLLCVNNGMVSADELSSTYYAFTCPAALLSIKAAVLGAVLKEPRMGASLLRLHFHDCFVQGCDASILLDDTANFTGEKTAFPNVNSVRGYEVIDKIKSALESMCPGVVSCADIVAVAARDSVVSLGGPSWEVKLGRKDSTNASLNDANKDLPAPFLDLSGLITAFSTKGFTAQEMVALSGSHTIGQAKCSTFRTRAYNDTNIDPSFAASLRARCPSTGGDGNLSPFDFTTPNFFDNSYFRNLVNKKGLLHSDQALFNGGSSDSLVTTYVSEPWRFRADFANAMIKMSQLSPLTGSNGQIRRNCRKLN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1218 320 CDD secretory_peroxidase 27 318 IPR033905 GO:0004601|GO:0042744
Lele40g1218 320 FunFam Peroxidase 31 170 - -
Lele40g1218 320 SUPERFAMILY Heme-dependent peroxidases 28 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 Pfam Peroxidase 48 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 Gene3D Peroxidase, domain 2 165 299 - -
Lele40g1218 320 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Lele40g1218 320 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 PANTHER PEROXIDASE 72-RELATED 25 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Lele40g1218 320 ProSiteProfiles Plant heme peroxidase family profile. 27 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele40g1218 320 FunFam Peroxidase 165 299 - -
Lele40g1218 320 Gene3D - 31 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1218 Lele-ChrLele40 22017780 22019149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1218 19 320 Peroxidase AT5G05340 58.224 1.27e-129 370