Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1182 ATGAATCATCAGACTCTTCTTCAGCCCCCCACCTGGTCAGTCCCCAATGACATAACCTCTGTTTTTGATCTATTCGATCTTCCCTCCACCTTCACCTTCGAAGATCATTTCCCATATCCAGTTGAAATGGGATCAGAAGCATCCAAATCCATAGAGAATTATTCCCCCTTCAATGAATTTGAAGTTTCTTCCGTCTTCTTCTCTCAAGATAATTTCCAGTACCCAGTTACTGAAGAAGATATTCTGGGAATATCATCCATGGACTGGGATGCTCTTGACCCTGATTTGAGTACCCAGTGTCTGAATACCCATGGATGGCCAGAAGAAAGTGAAGAAAGCTTTCAACCTTCCCAGAATCTTTCTTCTGATGCGGAAGTATCTTGGAGTTCTAGTCCATCCTCTCTTCAACTACCATCGCTGAACTTACCTCAAGAAGACATGGAAATGGATACCCAAGTGATTCTTCCGCATCTCATTGAAGCCCATGTTGAGGCGAGAGATCAGAACCAGAATGCTCTGGTAGAAGAAACCCTGAGATGCATAAACCAGAAAACAAGCCCACTTGCAGAAGATCCTCTGGAGCGCCTAGCATTCCACTATTCCTCCCAAAACATTACAGGAAATCCAGAGGGGTATTTCCTCAAGCAGGAGGCGTGCAAAAATTTTGATACTGCATTCAAAGTATTTTACCAAAGCACTCCCCATGGAAGATTTGCTCATTTTGCAGCCAATTCAGCAATTCTAGAAGCCATAACAGAGGATTCAGAAGCTATCCACATAATAGACTTCGACATGGGAGAAGGGGTTCAGTGGGCCCCTGTGATAGAGGCCATTTCTCAACAGAACAAGGCGCTGAAGTTGACATCAATCAAATGGGAAACAGAGCAAGAAAACTCTGAGGAACCCGGAACGAACCTTATTGAACACGCAAGATCCTGTGGTCTCAAGATGCAGATAGAAGACAAGAGTTTTGAGGAATTAGTTACAGAACTCAAGAAATATAACAAAAGAGATGGGAGTGTGAAGAGAGATTTCCTAATCTTTAACTGCATGGTGGGTCTTGCTCACATGGGGAGAGGAAGAAGCAGAAGATCAGTCATGGAGTTTCTAAATTTGGGCAAGAACCTGATCAACAAGAACACCTGCAACAGGGGAATCATCACTTTTGGGGACGGAGAAGCCGACGACAAACTGAGAAATGGCCTGAACTTCAGGTCATTCTTTGACGGTAACATGATCCATTACAAGGCATTAATGGAATCAATTGAATCAAATTTCCCTGCTTGTTTCTCACAAGCAAGAACAGCAATAGAGTTCTTATTCGTGGGACCCTATGTGTCTTCCGGTTCTTGGATGAAGAAGTGGGAAGAACTGAGAGGAAATAGCCATTTTCAGGCAGGGAATGGAAGAAGATTAAGCCAAGAGATGTTCATGGAAGCGAGGGAAATGTTGAGAGGAAGCAGGGAGGGGTCATATGAGGCTAGGATTGAGGGGCAAAATGGGAATGAAATGGTTCTCTTATGGAAAGGGTCACAGCTAGTCAAAGTATCAACTTGGTGA 1560 0.4378 MNHQTLLQPPTWSVPNDITSVFDLFDLPSTFTFEDHFPYPVEMGSEASKSIENYSPFNEFEVSSVFFSQDNFQYPVTEEDILGISSMDWDALDPDLSTQCLNTHGWPEESEESFQPSQNLSSDAEVSWSSSPSSLQLPSLNLPQEDMEMDTQVILPHLIEAHVEARDQNQNALVEETLRCINQKTSPLAEDPLERLAFHYSSQNITGNPEGYFLKQEACKNFDTAFKVFYQSTPHGRFAHFAANSAILEAITEDSEAIHIIDFDMGEGVQWAPVIEAISQQNKALKLTSIKWETEQENSEEPGTNLIEHARSCGLKMQIEDKSFEELVTELKKYNKRDGSVKRDFLIFNCMVGLAHMGRGRSRRSVMEFLNLGKNLINKNTCNRGIITFGDGEADDKLRNGLNFRSFFDGNMIHYKALMESIESNFPACFSQARTAIEFLFVGPYVSSGSWMKKWEELRGNSHFQAGNGRRLSQEMFMEAREMLRGSREGSYEARIEGQNGNEMVLLWKGSQLVKVSTW 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1182 519 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 157 513 IPR005202 -
Lele40g1182 519 MobiDBLite consensus disorder prediction 103 139 - -
Lele40g1182 519 Pfam GRAS domain family 161 519 IPR005202 -
Lele40g1182 519 ProSiteProfiles GRAS family profile. 146 519 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1182 Lele-ChrLele40 21793492 21795051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1182 145 519 GRAS Transcription Factor Family AT5G66770 25.253 4.44e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele40g1182 GRAS 2.6e-37 CL0063