Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1181 ATGGCTGCATCATCATCGTTAACACTTGGCTTTCTTCTCCATCTGATTCTTCTTTCCCTTCTAGTTGCAGCCAAGGCTCAAGCAGTGAACCAGTTTTCCTTTGTGTATGAGGGATTCGATGATGGGAGCCTAGTCACTCAGGAAGCTGCACGATTTACGACCGACCGTATGCTTCAGCTCACCGACACATCCAACAATATTGTAGGCCGTGCTTTCTATTTTAAAAGCATTCAAATGCTTAACAATTCAGACCAACCACAAAAAGCTTCTTCCTTTAGCACACACTTTGTTTTCTCCATCGTCCCCTCAACCTCTGCTCCAGGCGGCTTTGGCCTTGCTTTCGTCCTAGCACAAAATATCTCCGTGTTTCCAGAAAATCAACACGGGCAAAATCTTGGTATTTATGGTGCCAATGAGACGAGCATATTCGCAGTGGAATTTGATACGGTGAAAGGCTTCGAAAAAGGTGAGTCTGACACAGAAGGGAACGATGTTGGGATCATGATCAATGGCACAGACTCAGGTGACTCTAAACCAGCTGCTTACTTTGGGACGGATTCTCAATTGTTTAATTTCAGTATGGAGCAATCTGACGCTGTACAAGCTTGGATAGATTATGATGGTGACAAGAGAATCGTTAACGTGACCGTAGCTCCATTATCTGTGCCTAATAAACCTTCCAAACCGCGTATATCAAATCGTCCCACTGGAATGGAGCTAACCGAACACATGTATGTCGGTTTCTCAGCATCAACAGGGGGGGCAAGTAAAGCAAGCTCTCATTACATTCTGGGGTGGAGCTTTGCGGTCAATGAAGCTGCTCGTTCGCTTAACCTTTCCAACCTTCCACGTCCACCACCAAAAGTGAAAGATCCTTCCTCTTTTCCTTGGGTCAACTTGGCCATAGGAGTTTTGTCTGCTTTAACCTTGATATTGTTGCTTTCTTTGTGTTCTGTAACATTGTACAAGAAGTACAATCATTTTGAAGCTCTTGAGGATTGGGAACTAGATTGTCCTCACAGATTCAGATACAAAGATCTTCACATATCAACGAAAGGAAAGGCATCCCCAAGCTCTGATGTGTATGCTTATGGGGTCTTACTTCTTGAAGTGGTTAGTGGGAGGAGACCTATTGGGTCAGAACAATTCTTTTTGGTGGATTGGGTTGTGGAGAATCACAATATGAGTCAGATTCTTGAAGTGGTTGATCCAAAGTTGGGATCAGATTATGTTAAGGAAGAGGTGGAATTGGTTCTGAAACTGGGTCTTGTCTGCGCTCAGCATCACGCAGATTCAAGGCCAACCATGAGACAAGTGATGAGGTACAAATACAATTTATGTATATATCATCGAGTTTTTGTTCTTGTTGATGTCTATGCCGTACGAAGTTTGTTTGAAACTCTTCGAAATGGCTTGCATAACAGTGAATAA 1431 0.4333 MAASSSLTLGFLLHLILLSLLVAAKAQAVNQFSFVYEGFDDGSLVTQEAARFTTDRMLQLTDTSNNIVGRAFYFKSIQMLNNSDQPQKASSFSTHFVFSIVPSTSAPGGFGLAFVLAQNISVFPENQHGQNLGIYGANETSIFAVEFDTVKGFEKGESDTEGNDVGIMINGTDSGDSKPAAYFGTDSQLFNFSMEQSDAVQAWIDYDGDKRIVNVTVAPLSVPNKPSKPRISNRPTGMELTEHMYVGFSASTGGASKASSHYILGWSFAVNEAARSLNLSNLPRPPPKVKDPSSFPWVNLAIGVLSALTLILLLSLCSVTLYKKYNHFEALEDWELDCPHRFRYKDLHISTKGKASPSSDVYAYGVLLLEVVSGRRPIGSEQFFLVDWVVENHNMSQILEVVDPKLGSDYVKEEVELVLKLGLVCAQHHADSRPTMRQVMRYKYNLCIYHRVFVLVDVYAVRSLFETLRNGLHNSE 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1181 476 PANTHER - 352 442 - -
Lele40g1181 476 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 271 IPR013320 -
Lele40g1181 476 Pfam Legume lectin domain 33 282 IPR001220 GO:0030246
Lele40g1181 476 CDD lectin_legume_LecRK_Arcelin_ConA 32 271 IPR001220 GO:0030246
Lele40g1181 476 Pfam Protein tyrosine and serine/threonine kinase 349 440 IPR001245 GO:0004672|GO:0006468
Lele40g1181 476 Gene3D Transferase(Phosphotransferase) domain 1 335 449 - -
Lele40g1181 476 Gene3D - 28 274 - -
Lele40g1181 476 SUPERFAMILY Protein kinase-like (PK-like) 353 456 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1181 Lele-ChrLele40 21781533 21784235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1181 344 442 Receptor kinase-like Gene Family AT5G01540 50.505 6.81e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele40g1181 Lectin_legB 9.1e-58 CL0004