Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1180 ATGGCTTCATCATCATCCCCATCAGTGCTTGGTTTCCTCCTCCTCCTCTTTCTTGCTCTTCTGGTTGCATCCAAGGCTCAACAAGATACCCATTTTTTATTTGAGGGATTCAACAACAGTGAAAATTCTCTAAACCTAGAAGGAGCTACAGTTGTCAAACCCAGTGGTGCGCTTAAACTCACCAACAGATCATACAATATTGTAGGCCATGCTTTCTATTACAGATCCTTTCAGATGCTTAATACAACCAATACAACCAAGCGTAAAGTTTCTTCCTTTAGCACAACCTTTGTTTTCTCCATTGTCCCTTCATCTTCTGGCCCTGGAGGTTTTGGCCTTGCTTTCGTCATAGCTCCTTCAACTCAATTTCCATTGTCAAGCCCTGGCCATCTTCTTGGTCTCGTTAACTCCTCCAATGATGGGAATTCTTCAAATCACCTTTTTGTAGTTGAATTTGATACGGTTAATGGCTACAGAAGTGAGGCTGACAGTAAAGGGAACCATGTTGGGGTCAATAAAAACGGCATGAACTCAATCGTCAATGAACCAGCTGCTTATATTAAAGAAGGCACCGAAGCTCAGAAGGAAGAATTCAGCATGCAGGAATCTGAAGCTGTTCAAGCTTGGATAGATTATGATGCTGACAAGAAAATTGTGAACGTGACTGTAGCTCCTATATCATTGGCTATTAAACCCTCCAAACCACTCATATCTCGTACGATTGATCTTCAGGAGGTTCTGAAGAACACCATGTTTGTTGGTTTCTCAGCTTCAACTGGGGAAAGTAAAGCAAGCTCCCATTACATTCTGGGATGGAGCTTTTCAATGAATGGTCCTTCTGCCGCACTCAACCGTTCAAAGCTTCCAGAGCCACCACCAAAGGAGAAAGATCCAAGTTCATCTTCTTTCCATTGGGTCAAACTTGCCATTGGAGTTCTATCTGCTATAATCATAATATTGTTGGTTTCCTTGTGTTCAGTAACATTGTACAGGAGGTACACCAATTATTTCGAGACTCTTGAGGATTGGGAACTAGACTGTCCTCACAGATTCAGATACAGAGATCTTCATGTAGCAACAAAAGGATTCAAAGAGAGTGAGATGATAGGAATCGGAGGTTTTGGTGAAGTGTACAAAGGCATCTTGCCTTCGACAGGAACCGAGGTTGCTGTGAAGAGGATTGTACGGGGTACAATCCAAGGAATGAGGGAATTTGCAGCCGAGATCGAAAGCCTAGGAAGATTAAGACATAAAAACTTGGTCAATCTTCAAGGATGGTGTAAACGAAAGAATGATCTTCTTCTAGTGTATGATTACATCTCCAATGGAAGCCTTGACTCACTCATCTTCAATCCAGGCATTGTTCTGAGCTGGGATCAAAGGTTCAATATCATCAAAGGCGTAGCAAATGGGCTATTATATCTGCATGAAGAGTGGGAACAAGTAGTGATTCACAGGGATATCAAAACAGGAAATATTCTCATAGATGAAGATTTAAATGCTCGTGTTGGTGATTTTGGGCTTGCCAGGTTATATGATCATGGTAAAGTATCTCACACAACCAATGTGGTTGGGACAATTGGGTATATAGCGCCAGAATTAACTCGTACAGGGAAAGCATCCACAAGTTCTGATGTGTATGCTTATGGGGTTTTGCTTCTTGAAGTTGTTAGTGGGAGGAGACCCATTGACCAGTCAGGGCAATTTTTCTTGTTAGATTGGGTTGTAGAGAACCACAGCTTGGGCCAGATTCTTGAAGTTGTTGATCCAAAGTTGAATTCAAATTATGATGAAGAAGAGGCGGGATTGGTTCTGAAACTCGGGCTTCTCTGTGCTCAAAACAGAGCAGATTTGAGACCAACCGTGAGACAAGTGACAAGATATCTGAACTTTGATGATCCTGTTCCAGTTATTGGGGATTGGAGGGGACAGATTAATTCTGGAAGTATGAGCTCAGGTTTTCTGGAAATTGTGTCTGCAAGTAGTACAATCTCAACTTCGTATAACTTATCCTCCATTAATAGCATGAGTAGTAGGCTTATAGAAGCTGGTAGCGGGAGGTAG 2064 0.4205 MASSSSPSVLGFLLLLFLALLVASKAQQDTHFLFEGFNNSENSLNLEGATVVKPSGALKLTNRSYNIVGHAFYYRSFQMLNTTNTTKRKVSSFSTTFVFSIVPSSSGPGGFGLAFVIAPSTQFPLSSPGHLLGLVNSSNDGNSSNHLFVVEFDTVNGYRSEADSKGNHVGVNKNGMNSIVNEPAAYIKEGTEAQKEEFSMQESEAVQAWIDYDADKKIVNVTVAPISLAIKPSKPLISRTIDLQEVLKNTMFVGFSASTGESKASSHYILGWSFSMNGPSAALNRSKLPEPPPKEKDPSSSSFHWVKLAIGVLSAIIIILLVSLCSVTLYRRYTNYFETLEDWELDCPHRFRYRDLHVATKGFKESEMIGIGGFGEVYKGILPSTGTEVAVKRIVRGTIQGMREFAAEIESLGRLRHKNLVNLQGWCKRKNDLLLVYDYISNGSLDSLIFNPGIVLSWDQRFNIIKGVANGLLYLHEEWEQVVIHRDIKTGNILIDEDLNARVGDFGLARLYDHGKVSHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVLLLEVVSGRRPIDQSGQFFLLDWVVENHSLGQILEVVDPKLNSNYDEEEAGLVLKLGLLCAQNRADLRPTVRQVTRYLNFDDPVPVIGDWRGQINSGSMSSGFLEIVSASSTISTSYNLSSINSMSSRLIEAGSGR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1180 687 ProSiteProfiles Protein kinase domain profile. 363 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1180 687 SUPERFAMILY Protein kinase-like (PK-like) 347 632 IPR011009 -
Lele40g1180 687 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Lele40g1180 687 FunFam Lectin-domain containing receptor kinase VI.3 348 439 - -
Lele40g1180 687 Pfam Protein kinase domain 363 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1180 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Lele40g1180 687 CDD STKc_IRAK 369 630 - -
Lele40g1180 687 SMART serkin_6 363 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1180 687 CDD lectin_legume_LecRK_Arcelin_ConA 30 278 IPR001220 GO:0030246
Lele40g1180 687 Gene3D Transferase(Phosphotransferase) domain 1 440 636 - -
Lele40g1180 687 FunFam L-type lectin-domain containing receptor kinase S.4 440 640 - -
Lele40g1180 687 PANTHER - 23 631 - -
Lele40g1180 687 Gene3D Phosphorylase Kinase; domain 1 348 439 - -
Lele40g1180 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 293 IPR013320 -
Lele40g1180 687 Gene3D - 27 278 - -
Lele40g1180 687 Pfam Legume lectin domain 30 289 IPR001220 GO:0030246
Lele40g1180 687 FunFam L-type lectin-domain containing receptor kinase V.9 29 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1180 Lele-ChrLele40 21778006 21780162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1180 32 640 Receptor kinase-like Gene Family AT3G08870 51.780 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele40g1180 Pkinase 1.2e-49 CL0016