Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1179 ATGGCGGCTACATCATCATCATCATCATCAACGCTCAGTTTCTTCCTCCTCTTTCTTTCACTCTCAGTTGTAGCCAAGGCTCAACCAGAAACCAATTTTACATACCATGGATTCAAAAATATTGATGAAACTGAACTTATCCTTGACGGAGCTACCATTATCAAATCCAGTGGATTGCTTAGGCTCACCGACACATCAAACAATATTACAGGCCGTGCTTTCTTCTCCAAACGTATTCAACTGCTTTCTAATTCAACCCCACACCAGAAAGCTTCTTCCTTCAGCACATCCTTCGTTTTCTCCATTGTCTCTTCAACCTCTGGCCCAGGAGGCTTTGGCCTTGCTTTCACCATATCACCAAAACCCCATTTCCCAGAGGCGGAAGCTGGACACTTTCTTGGTCTTTTCAACACACACAATGATGGGAACCCTTCAAATCACATATTTGCAGTTGAATTTGATACGGTTGATGGCTACGGAAGAGGCGAGTCTGACGCCGAAAGTAACCATGTTGGGATCAATCTCAATGGCATGAACTCAACGGTTGACGAATCAGCTGCTTACATTATTGAACAAGGCCCAGATGCTCCAAAGAAGGAAAACTTCAGCTTGGAGCAAGTTGATGCTGTACAAGCTTGGATAGATTTTGATGGTGATGAGTTAATTTTGAATGTGACCATAGCTCCAATATCAGCAACGAAACCCTCCAAACCACTTATATCCCATCATCCCATCAACCTTACTGGTAACTTGAAGGAAAACGTCTATGTTGGTTTCTCTGCATCAACCGGGGGGAATAAAGCAAGCTCTCATTACATTCTGGGGTGGAACTTTGCAGTCAATGCACCTGCTCCTTCGCTTAACCTTTCTAATCTTCCACGTCCACCACCAAAAGTGAAAGACCCTTCCTCTTTTCCTTGGGTCAACTTGGCCATAGGATTTTTGTCTGCTTTAACCTTGATATTGTTGCTTTCTTTGTGTTCTGTAACATTGTACAAGAAGTACAATAATTTTGAAGCTCTTGAAGATTGGGAGCTAGATTGTCCTCACAGATTCAGATACAAAGATCTTCACAAAGCAACAAAAGGGTTCAAAGAGAGTGAACTAATAGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGTGTCTTGCCTTCCACTGGAACTGAAGTTGCCGTGAAGAGGATTGTCCGAAGCCCAATCCAAGGAATGAGGGAATTCGCAGCCGAGATTGAAAGTTTAGGAAGGTTAAGACACAAGAATTTAGTCAATCTTCAGGGATGGTGTAAGCAAAAAAATAACCTTATTCTAATCTATGATTATATCCCCAATGGAAGTCTTGACTCACTCTTGTATAATCAAAGCTTTGTTCTGAATTGGGAACAAAGGTTCAATATCATCAAAGGCATAGCTAATGGGCTATTGTATCTTCATGAAGATTGGGAACAAGTGGTGGTCCATAGAGACATCAAAACCAGCAATATCCTCATAGATGCAGATTTAAATGCTCGCTTGGGCGATTTTGGCCTTGCTAGGCTCTATGATCATGGTGGAGAATCACACACAACCAATGTGGTTGGGACAATTGGGTACATAGCACCAGAATTGACTCGCACAGGAAAGGCATCCACAAGCTCTGATGTGTATGCTTATGGGGTTTTGCAACTTGAAGTGGTTAGTGGGAGAAGACCCATTGGATCAGAACAATTCTTTTTGGTGGATTGGGTCATTGAGAATTACCGCTTGGGTCAGATTCTTGAAGTGGTTGATCCTAAGTTGAACTCAGTTTGTGCAGAAGAGGTGGAAATGGTTCTGAAACTGGGTCTTCTTTGTTCTCAATATAATGATGACTCAAGGCCAACCATGAGACAGGTGACAAGGTACCTGAACTTTGATGACCCTCTTCCTAATATTTCTGCTATTCGGCACAAGGATTCTACGAGCAGTAGAATGAGCTTGGATTTCTTAGAAGGTAAGAGCACAAGTGCAATCTCAACATCTCTTAATTTTTCCTCCGTTGATGGCATGAATAGCAGCATGTCTATAGAAGTAGGTGTTTAG 2058 0.4237 MAATSSSSSSTLSFFLLFLSLSVVAKAQPETNFTYHGFKNIDETELILDGATIIKSSGLLRLTDTSNNITGRAFFSKRIQLLSNSTPHQKASSFSTSFVFSIVSSTSGPGGFGLAFTISPKPHFPEAEAGHFLGLFNTHNDGNPSNHIFAVEFDTVDGYGRGESDAESNHVGINLNGMNSTVDESAAYIIEQGPDAPKKENFSLEQVDAVQAWIDFDGDELILNVTIAPISATKPSKPLISHHPINLTGNLKENVYVGFSASTGGNKASSHYILGWNFAVNAPAPSLNLSNLPRPPPKVKDPSSFPWVNLAIGFLSALTLILLLSLCSVTLYKKYNNFEALEDWELDCPHRFRYKDLHKATKGFKESELIGVGGFGAVYKGVLPSTGTEVAVKRIVRSPIQGMREFAAEIESLGRLRHKNLVNLQGWCKQKNNLILIYDYIPNGSLDSLLYNQSFVLNWEQRFNIIKGIANGLLYLHEDWEQVVVHRDIKTSNILIDADLNARLGDFGLARLYDHGGESHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVLQLEVVSGRRPIGSEQFFLVDWVIENYRLGQILEVVDPKLNSVCAEEVEMVLKLGLLCSQYNDDSRPTMRQVTRYLNFDDPLPNISAIRHKDSTSSRMSLDFLEGKSTSAISTSLNFSSVDGMNSSMSIEVGV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1179 685 CDD lectin_legume_LecRK_Arcelin_ConA 31 281 IPR001220 GO:0030246
Lele40g1179 685 SUPERFAMILY Protein kinase-like (PK-like) 350 650 IPR011009 -
Lele40g1179 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Lele40g1179 685 Gene3D Transferase(Phosphotransferase) domain 1 441 635 - -
Lele40g1179 685 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524
Lele40g1179 685 Gene3D - 27 283 - -
Lele40g1179 685 FunFam Lectin-domain containing receptor kinase VI.3 349 440 - -
Lele40g1179 685 Gene3D Phosphorylase Kinase; domain 1 349 440 - -
Lele40g1179 685 Pfam Protein kinase domain 364 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1179 685 Pfam Legume lectin domain 31 292 IPR001220 GO:0030246
Lele40g1179 685 PANTHER - 49 631 - -
Lele40g1179 685 SMART serkin_6 364 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1179 685 ProSiteProfiles Protein kinase domain profile. 364 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1179 685 CDD STKc_IRAK 370 629 - -
Lele40g1179 685 FunFam L-type lectin-domain containing receptor kinase S.4 441 641 - -
Lele40g1179 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 297 IPR013320 -
Lele40g1179 685 FunFam L-type lectin-domain containing receptor kinase V.9 30 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1179 Lele-ChrLele40 21774326 21776584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1179 22 637 Receptor kinase-like Gene Family AT3G08870 51.587 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele40g1179 Pkinase 2e-50 CL0016