Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1175 ATGGATACTATTCCCTTGGCTTACCAAGAGCACCTCCCTGCTGCTCCTGGTTGGCTAAACAAAGGGGATAACGGATGGCAGTTGACAGCAGCTACACTAGTGGGAATCCAGAGCATGCCAGGGCTTGTGATTCTGTATGCGAGCATCGTCAAGAAGAAATGGGCTGTTAACTCTGCTTTCATGGCTCTCTATGCCTTCGCTGCTGTTCTCATATGTTGGGTCCTTGTTGGTTTCAGAATGGCCTTTGGAGACGAACTTCTTCCCTTCTGGGGTAAGGGTGCCCCAGCTTTAGGCCAAAAGTTCCTCATAAAACGAGCCAAGGTCCCTGAAAGTACTCACTTCTACAGCAACGGCACTTTAGAAACCCCAACCGTAGAGCCATTTTTTCCCATGGCTTCGCTTGTGTACTTCCAATTCACTTTTGCTGCTATAACGCTTATCTTGCTAGCTGGTTCGGTTCTTGGTCGCATGAACATTAAGGCCTGGATGGCTTTTGTCCCTCTTTGGCTCATTTTCTCATACACCGTAGGGGCATTCAGCTTATGGGGCGGTGGCTTCCTCTACCAGTGGGGCGTCATCGATTACTCCGGCGGCTACGTTATCCACCTCTCGTCCGGAATCGCCGGCTTCACCGCCGCATACTGGGTAACTAAGATTCCAATTCCTTCACATGTGAAAAAGATTTTAATGCTGAAGAGCGACAGGGAGAGGTTTCCACCGAACAATGTGTTGCTGATGCTTGCGGGATCGGGACTTCTATGGATGGGGTGGTCGGGGTTCAACGGCGGAGCGCCGTACGCGGCGAGCGTTGACTCGTCGATAGCAGTGTTGAACACGAACATATGCGCGGCGACGAGCCTTTTGGTATGGACGTCACTGGACGTCGTCTTCTTCGGGAAGCCTTCGGTGATCGGAGCCGTTCAGGGTATGATGACCGGACTTGTCTGCATCACCCCCGGAGCAGGTTTGGTGCAATCGTGGGCGGCTATAGTAATGGGAATCCTGTCAGGCAGCTTTCCATGGTTCACAATGATGATCCTTCACAAAAAATCTTCTCTCCTTCAACAGGTGGATGACACGCTAGGAGTATTTCACACACACGCTGTGGCGGGGCTCATGGGTGGCCTCCTAACTGGTCTGTTGGCGGAACCACAGCTTTGTCGGCTGACTTTGCCGGTGACCAACTCGAGAGGCGCCTTTTATGGCGGCAGTGGCGGCATGCAATTCGTGAAGCAGATTGTGGCGGCCCTATTTGTGACTGGATGGAACTTGGTGTCCACCACACTCATTCTTCTGGCCATTCGTCGGTTTATACCGTTAAGGATGCCGGATGAGCAGCTCAAGATCGGTGATGACGCCGTGCACGGTGAAGAGGCCTATGCACTTTGGGGCGACGGAGAGAGATATGAGCCTAACAAGCATGGCTCCTCAGACACTCATGCTTCTACAGTTTCTCCGTATGTGACTGGCGCAAGAGGAGTCACCATCAATTTATAG 1497 0.5217 MDTIPLAYQEHLPAAPGWLNKGDNGWQLTAATLVGIQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVGFRMAFGDELLPFWGKGAPALGQKFLIKRAKVPESTHFYSNGTLETPTVEPFFPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGFTAAYWVTKIPIPSHVKKILMLKSDRERFPPNNVLLMLAGSGLLWMGWSGFNGGAPYAASVDSSIAVLNTNICAATSLLVWTSLDVVFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSFPWFTMMILHKKSSLLQQVDDTLGVFHTHAVAGLMGGLLTGLLAEPQLCRLTLPVTNSRGAFYGGSGGMQFVKQIVAALFVTGWNLVSTTLILLAIRRFIPLRMPDEQLKIGDDAVHGEEAYALWGDGERYEPNKHGSSDTHASTVSPYVTGARGVTINL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1175 498 Gene3D Ammonium transporter AmtB like domains 6 463 IPR029020 -
Lele40g1175 498 FunFam Ammonium transporter 7 463 - -
Lele40g1175 498 SUPERFAMILY Ammonium transporter 18 442 - -
Lele40g1175 498 PANTHER AMMONIUM TRANSPORTER MEP2 11 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele40g1175 498 TIGRFAM amt: ammonium transporter 23 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele40g1175 498 Pfam Ammonium Transporter Family 26 460 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1175 Lele-ChrLele40 21751342 21754750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1175 131 498 Inorganic Solute Cotransporters AT2G38290 72.776 0.0 526