Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1149 ATGATATCTGAGAGGAGCGTTAGATGCAAATTCAAAATTAACGCGCCTTTCTCCACAATCTTCTCCACGGCTACTTCCTCAGCGGTTCACCCTCTGCCCTCTGCCATCGTTTTCCACTATCCATATCCGGCACAGCCAGATATGGCTTCCAGGAACCAGAAAAGGCCTCCGCGTAGCCCCTCCAATACAGTCCCTTCGGAAAAGCGTCGAAGAGTTGGAGCAGAAATGATGGATCGGCAGGGAAACACTGGCCGGGGCAGGCAGCCATTTGCCTCAGTGAACAAAGGGCCAGAAGCTAATAGAGCAAATGATGTTGTCAGTACCGAGGGCCCAGAATGTAGAATTGTCGAGTACACCGCCAAAGAGTACGTGGAGGCGCTGTTCAGTAGGAAGTTTAAAAAGGGAAATCCCTTTGATAATAAGAAAAAAATGGACCAGATGGGAGATTACATTAGGGACCTTAAACATTGTGTAAAATGCTTTCAAATACTTGAAGAAAATTACATTGAAGAAAAGGAAAAGATTCAATCTGCACTTGAATCTGCCGAGAAGAAGTGCAATGATACTGAGACTGAAATGAAAAAAAAGATTGAGGAGTTGAGCCACGTAATATCTGATTCGAGGAAGACAATTGTTTCTTTGGAAGAGAGAATTTCAAAGGAAGAATCCTTGAAGTTGGAAGCAATGGAACGTCATAGAGAAGAAAAGGAAGCCAGAATTGCTGCTGAGAAGATGCAAGTTTCTCTATCAACTGAGCTTGAGAAAGTTAAGCAAGAGAAATTAGAGGCTGAGCAAAAGGCCAAATCGAATGAGCTTTTGTACAATTCTTCGAAAGAGTATAATATGGACCTGCAGCGCTACAATAGTCGACTCCAGTCAGATCTTCAATCAACTAATGACTCACTTAAGGAACTGGAAAAGGAGAAAACAGCCATTGTTCAAACCCTTAGCGATGTGAGAGGTCACAATAAGACATTGCAGGGTCAGCTGGCATCTGTTAAAGCTTCACGTGAAGAGGCTACAAAACAAAAAGATGCACTGGCACATGAGCTCAGTTGTCTCCGTGAAGAATTAAAACAAATTAGAGATGATCGTGATCGGCAACAAGCACAAATACAGGCTTTAACTGGGGAAGTGGCATACTACAAAGAATTTACTGGGAATTCATGCGCACAATTGGATAGCTTGACAAGTAAAATAAAGGATATTGAGGACACATGTTCGTTTCAGAGGGACCAAATAAATAGACTACAACATCAATTGGCTGCTGAGAAAGACAAATTGAAGATGGCTGACCTATCGGCTTTAGAAACAAGAACAAGTTTTGAAGAGCAGAAAAGAAGTATATGTGAATTGCGGGATCGCCTGGCTGATAAAGAATTCCAAATAATTGAAGGAGAGAAATTAAGGAAAAAGTTGCACAACACTATCCTTGAGCTCAAAGGGAATATTCGTGTCTTTTGTCGAGTTCGACCTTTGCTACCAGAAGATGGCGTCGGAACAAACGTGGTTGTTTCCTACCCTACATCAACAGAAGCTCTTGGCCGAGGCATTGAATTGGTCCAAAACGGGCAAAAGTACCCTTTTACATTTGATAAGGTCTTCCATCATGAGGCTTCTCAGCGGGACGTTTTCACTGAGATATCGCAGTTGGTGCAAAGTGCGCTTGATGGGTACAAGGTTTGCATTTTTGCTTATGGTCAGACAGGTTCAGGCAAAACATATACAATGATGGGTAGGCCTAATGCTCCAGATCTGAAAGGATTGATTCCACGTTCTCTAGAACAGATCTTCCAAACTAGTCAAGCCCTCAAGGACCAGGGTTGGACATACAAAATGCAGGCTTCAATATTAGAAATATATAATGAGACAATCCGAGATTTGTTGTCGTCGAACCGGTCAAGTGGAACCGATCTAACTCGAACAGAAAATGGTGTCCCTGGGAAGCAGTACACTATCAAACATGACGCTAATGGAAACACAGAAGTTTCTGACCTCACTATTGTGAACGTTTGTAGTGTAAAGGAGATATCCTCTCTCCTACAACAGGCTGCAAATTGCAGGTCGGTAGGAAGAACACAGATGAATGAACAATCATCAAGAAGCCATTTTGTTTTCACTTTGCGTATAACTGGGGTTAATGAGAATACTGAACAACAAGTGCAAGGCGTCTTGAATCTGATTGATCTAGCCGGAAGCGAAAGACTGTCAAAGAGTGGGGCAACTGGGGACCGACTTAAGGAAACTCAGGCTATCAACAAAAGTTTGTCGTCTTTGAGCGATGTCATGTTTGCTTTGGCGAAGAAAGATGAGCATGTTCCTTATAGGAATTCTAAATTGACATACCTTCTCCAGCCATGTCTTGGTGGCGATTCCAAAACGTTGATGTTTGTGAATGTTTCGCCCGATCCTTCTTCGTCTGGGGAGTCACTTTGTTCTCTCCGTTTTGCTTCCAAAGTGAATGCATGTGAGATTGGCATTCCAAGGCGTCAGACATCGTCCAAGTCTTTTGATTCTCGGATGAGCTATGGGATTACATCTGTACTTATTGACTGGAGAGGCTTGGCTATAGCTTCTACTAATGATCTGTATCATTCACCGTTGATGTTAGTCAATTTATCTGAGCAGCTTGTTAGTTTCAATAAATTTGTATTTGATGCTTAA 2664 0.4245 MISERSVRCKFKINAPFSTIFSTATSSAVHPLPSAIVFHYPYPAQPDMASRNQKRPPRSPSNTVPSEKRRRVGAEMMDRQGNTGRGRQPFASVNKGPEANRANDVVSTEGPECRIVEYTAKEYVEALFSRKFKKGNPFDNKKKMDQMGDYIRDLKHCVKCFQILEENYIEEKEKIQSALESAEKKCNDTETEMKKKIEELSHVISDSRKTIVSLEERISKEESLKLEAMERHREEKEARIAAEKMQVSLSTELEKVKQEKLEAEQKAKSNELLYNSSKEYNMDLQRYNSRLQSDLQSTNDSLKELEKEKTAIVQTLSDVRGHNKTLQGQLASVKASREEATKQKDALAHELSCLREELKQIRDDRDRQQAQIQALTGEVAYYKEFTGNSCAQLDSLTSKIKDIEDTCSFQRDQINRLQHQLAAEKDKLKMADLSALETRTSFEEQKRSICELRDRLADKEFQIIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDGVGTNVVVSYPTSTEALGRGIELVQNGQKYPFTFDKVFHHEASQRDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPNAPDLKGLIPRSLEQIFQTSQALKDQGWTYKMQASILEIYNETIRDLLSSNRSSGTDLTRTENGVPGKQYTIKHDANGNTEVSDLTIVNVCSVKEISSLLQQAANCRSVGRTQMNEQSSRSHFVFTLRITGVNENTEQQVQGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVMFALAKKDEHVPYRNSKLTYLLQPCLGGDSKTLMFVNVSPDPSSSGESLCSLRFASKVNACEIGIPRRQTSSKSFDSRMSYGITSVLIDWRGLAIASTNDLYHSPLMLVNLSEQLVSFNKFVFDA 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1149 887 Coils Coil 161 273 - -
Lele40g1149 887 PRINTS Kinesin heavy chain signature 773 794 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele40g1149 887 PRINTS Kinesin heavy chain signature 693 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele40g1149 887 PRINTS Kinesin heavy chain signature 724 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele40g1149 887 PRINTS Kinesin heavy chain signature 558 579 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele40g1149 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 821 IPR027417 -
Lele40g1149 887 Coils Coil 400 434 - -
Lele40g1149 887 FunFam Kinesin-like protein 429 825 - -
Lele40g1149 887 Pfam Kinesin motor domain 489 821 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele40g1149 887 PANTHER KINESIN-LIKE PROTEIN KLP-3 329 835 - -
Lele40g1149 887 Coils Coil 323 378 - -
Lele40g1149 887 MobiDBLite consensus disorder prediction 633 647 - -
Lele40g1149 887 ProSiteProfiles Kinesin motor domain profile. 483 823 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele40g1149 887 Coils Coil 288 315 - -
Lele40g1149 887 Gene3D Kinesin motor domain 427 825 IPR036961 -
Lele40g1149 887 MobiDBLite consensus disorder prediction 46 106 - -
Lele40g1149 887 MobiDBLite consensus disorder prediction 633 655 - -
Lele40g1149 887 CDD KISc_C_terminal 481 825 - -
Lele40g1149 887 SMART kinesin_4 481 831 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele40g1149 887 ProSitePatterns Kinesin motor domain signature. 723 734 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lele40g1149 887 Gene3D - 290 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1149 Lele-ChrLele40 21560637 21566012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1149 444 835 Calmodulin-binding Proteins AT5G65930 38.806 1.85e-76 270