Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1145 ATGGATGTTGTAGCCATCTTTCTTGCTCTTTGTTGGTTTGGTGTTGACGGAGCTGGTAGTACTTTTGGCTTAAATGGTCCAATTTGTCAAGTGTATTTGCTCTGTGTACCAAGCTATAAAAGCACATCAAAGGCAGTCAAGCAGGTAGTTCATCGCCATATCCCTATACTAGTTCGTACTATGGGCTCATCTCCAGATCTCCTTGAAATTATTTCAGATCCCCCACTTGGAAGTGAGAACCTCCTAATGCAGGTGTTGCACACACTTACTGATGGGACAGTCCCTTCGAAGGATTTAATAGTTACTGTCAAGAGATTACATGATTCAAAAGTTAAGGATGCGGAGATTCTTATTCCTGTATTGGCATATCTGCCAAAAGATGAGGTTCTCCCTATTTCTCTTGTTATGCTGGTCTTTCCTCACATTGTAAATCTTCCTGTGGATAAGTTCCAAGTTGCACTTGCTCGCATGTTACAGGTCACAGATGCATGCAATGCTTGCTTTGAGCAGCGGCAGATTTTCACTCAAGACATTCTTGCCAAAGTTCTGAATCAATTGGTTGAGCAAATCCCTCTTCCTTTATTGTTCATGCGGACAGTATTGCAATCTATTGGTTCTTTTCCAATACTGGTGGACTTTATAATGGGTATTCTCTCTCGTCTTGTGGGAAAGCAGATATGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGCGCACAATTGACACAACCTCAGTCATTCGGTGTTTTGCTTCAGCTACCTCCAGCACAACTGGAGAATGCTTTAAACAGATCTGCAGCACTTAAGGCACCATTGGTAGCTCATGCTAGTCAGCCAGATATCCAATCTTCACTACCCAGGTCCGTGTTGGTTGTTCTGGGAATTGCATCAGTTCCTCAGGTTCCAAGTCACCCACAAACTAGTCAAACACAGACAAGTGAGACCGGAAACTCCGACAAGGATACAGCAACAGAAAAATCCAAAGAATCTTCTACAGCTAGCTGA 1008 0.4306 MDVVAIFLALCWFGVDGAGSTFGLNGPICQVYLLCVPSYKSTSKAVKQVVHRHIPILVRTMGSSPDLLEIISDPPLGSENLLMQVLHTLTDGTVPSKDLIVTVKRLHDSKVKDAEILIPVLAYLPKDEVLPISLVMLVFPHIVNLPVDKFQVALARMLQVTDACNACFEQRQIFTQDILAKVLNQLVEQIPLPLLFMRTVLQSIGSFPILVDFIMGILSRLVGKQIWKYPKLWVGFLKCAQLTQPQSFGVLLQLPPAQLENALNRSAALKAPLVAHASQPDIQSSLPRSVLVVLGIASVPQVPSHPQTSQTQTSETGNSDKDTATEKSKESSTAS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1145 335 Pfam Symplekin tight junction protein C terminal 159 265 IPR022075 -
Lele40g1145 335 MobiDBLite consensus disorder prediction 301 335 - -
Lele40g1145 335 MobiDBLite consensus disorder prediction 301 319 - -
Lele40g1145 335 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 159 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1145 Lele-ChrLele40 21518048 21522076 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g1145 40 21518048 21522076 Lele42g0139 42 1107207 1115105 CCT
Lele40g1145 40 21518048 21522076 Lele44g1212 44 20611651 20614830 CCT
Lele37g1310 37 22176136 22189075 Lele40g1145 40 21518048 21522076 hybridization
Lele38g1204 38 23027246 23032568 Lele40g1145 40 21518048 21522076 hybridization