Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1136 ATGCGCAAGTCTTTCAAGGATTCCCTCAAAGCTCTTGAAGCTGATATCCAGTTCGCCAATACTCTCGCTTCTGATTACCCAAGAGATTACGATGGTGCCTGCATCCAAATGAGATTATCCTACAGTCCAGCAGCTCAAGTTTTTCTTTTTCTGGTTCAGTGGACTGATTGTCACCTTGCTGGAACCTTGGGATTGCTTAGAATTCTCATATACAAGGCTTACGAGGATGGTAAGACAACAATGTCCATTTTTGAAAGAAAAGCCAGTCTGAAGGAGTTCTATTGCGTGATCATTCCCTCTTTATTGCAACTCCACAGAGGAATTACTGATGTAGAAGACAGAAAGCAAAAAGAAATATGTGCTACTAAGTACAAGTCAAAACCTGTAGTCAGCAAAGGAAAGCAATCTGAAATTGACAGAGAGAGAGAGGAAGAATGTGGTATTTGCATGGAGATGAACAACAAGATTGTATTGCCCAATTGCAATCACTCAATGTGCATGAAATGCTATCGAGATTGTCTGAAAAGAGTGAATTCTGGGGACCTTTGGTTGTACATGAGCAACAATGAGATAGATGACATGGCCTCAATCACAAGGGAGAATTTAAAGAGGTTATTCGTGTACATTGAAAAGTTGCCTCTTCTTGTTCCAGATCCAGTATTCATGTCTCATCCTGTTCGCTGGTGA 687 0.409 MRKSFKDSLKALEADIQFANTLASDYPRDYDGACIQMRLSYSPAAQVFLFLVQWTDCHLAGTLGLLRILIYKAYEDGKTTMSIFERKASLKEFYCVIIPSLLQLHRGITDVEDRKQKEICATKYKSKPVVSKGKQSEIDREREEECGICMEMNNKIVLPNCNHSMCMKCYRDCLKRVNSGDLWLYMSNNEIDDMASITRENLKRLFVYIEKLPLLVPDPVFMSHPVRW 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1136 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 193 IPR013083 -
Lele40g1136 228 Pfam Zinc finger, C3HC4 type (RING finger) 146 175 IPR018957 GO:0046872
Lele40g1136 228 PANTHER RING FINGER PROTEIN 41, 151 3 222 - -
Lele40g1136 228 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Lele40g1136 228 SUPERFAMILY RING/U-box 141 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1136 Lele-ChrLele40 21462966 21465222 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1298 37 22093569 22095940 Lele40g1136 40 21462966 21465222 hybridization
Lele38g1195 38 22951075 22953892 Lele40g1136 40 21462966 21465222 hybridization