Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1114 ATGGAGATCATTGATGATGGATCTTCTAGAGCTCAAGCTTCACGAAGTTGGCTGCACCACCCCTTCCTTCTAAGTCCGAGTGCCTTCTTCAGCTGGGCTTTGCTTGTAAGCTACAACATGGTGGAGTATGCATGTGTGTCGATTCTGATAACCTTCTACACACAACAAGCCATGAGAGATCAACTAGTTGAAGCAGCCCTATTCTTGTGTCTCCAAGAGGGCCTCGCTTCCCTCGCTGCCATACTTATTGTTCGCTTCACAAGGGAAACATCTGGTCGTCGTTTTTATGCAATTGTCATCTCCACAGCTTCTTATATTGCAGGAATAATGATTTTATGGTCCTATGCAAGACACAGTCCTCAAGAGAAGAAGGTGCCACTTTTCTTGGTGGTATCTTGTCTTTTTGCATTAGGAAAGGGAGGAGCAGATCCACCTCTCAAGTCATTTCTTGAGCATAATTTATGTGAAAGCCATCAGAGCAATAATATTAAGGAGACCAAATCTGCTGATATCCGCAAGAACATATGGATTCAGAGCGCTTGGATCCTCGGAGCCATCATAGGTATCTTTGGGTTTTTAGGGCTTCGGTGGGTGCGAGTTTTTCAAATCTCTGCTATTGTAATGGTATCATCTGGTCTCTTGTTCCTTTTTTGCGCCAATAGTACCACTAGACCTATCTATCAATCAGTTCATAGAGATGCCACCACAGTCCCAAAACGAGAGAGAAACGTCAAGTGGCTTTTGATGTTGAGCACCATCGGATACAGCTTAGTCTTGGCTACTGGTAACATTTTCTTTCAGGAGCAAGGTACTAACATGGAGCCTCTGACCATAAAGGGGAAGGAGGTTAGGTTTTCTGTCATGATTGTGATAAAGCGCGCTGTGAATGAAATCACCATACTCATATTTGGTTTATTTAAGGCTAATAAAAAGCAAGGGATCGCATTAGTAAGAATTGGTAGTGGAATGGTTTGTGCTATTATATGCTGTGTTATAGCTTGGAAAGTAGAGATTCAGAGAAAGAAAGTGGTTGATGAAAACGACACCAATAAGACCAGCGTGGCATGGTTGTGTGCTCACTATGTTCTTTTAGGACTCGTCGAAGGGTTGTCCCAAAGTGGATTAGAGGAATTGTTGGCTCATGATGATGATGAGAATCAGAGATTGAGGAATCCTGGGAGGCTATCGAAAGACATGGTTTCATGTGTTGGCAAGATACTGGGGATTCCTAGTATTTTGATTGTGAGAAGGTGGTTCAAGAACTTCAACAAGGATGAAGCTCATTTGGATAGGTACTATGTGATGCTGGCAATATTTGCGTCTGTGTTCTTCTGCATATACCTTGGTGTTGCTTTTCTGTATATGAACTCGTGCCCAATGACGCAGAAGATGAAGGTGGGGTTACAAGGCGTCGCTTCCTTCGCAGCTATAGTTCTTGTTCGCTTCACCTGTGAAAGATTTGGCCGTCGTTTTTTTCTGGCTATTGTCATCTCCACTGGTTCCTATATCGCAGGATTAATTGTTTTATGGACCTTTGCAAGAAAGGAACACCGAGAGAAGAACGTGCCTCTTTTCTTAGTGATATCTGTGCTTTTCGCATTAGGAAAAGGAGGGGCACATCCACTTCTCAAGTCATTTCTTGAGCATAAGTTATACGAATGCTATAATAATAAGGAAGAGAGTATAAATAGAGCAGAAATCTGCAAAAACATATGGGTTCAGAGTGCTTGGATTCTTGGAGCCACCATAGCTATCTTTGGCTTTATGGGACTCCCCATGGAAAGTAGAGAGTGTGCTCACTATGTTATTTTAGGACTCGTCGAAGGGTTGGGCCAAGATGGATTAGAGGAATTGTTGGTTCCAGATGATGATGATGAGAATGAGACATTGATGAATCCTGGGACGCTATCGAAAGACATGCTTGTGCCTCAAGATAAAGAACAGGAAGGTAGTAATGGTGTTGCTGAGCTACCACATGCTACCTCAAGAACTGGTTCGAAAATGGAGGCTGAAGACGAAGATGTGAGGGTAGAGAGGAAACTTATCGAAAACCATGAGCGTACTCGAGACTACAAAGATCCTCCTCCGGCACCGTTGTTTGAGCCCACTGAGTTATCTTCCTGGTCATTCTACCGAGCAGGCATCGCAGAGTTTGTTGCCACCTTCTTGTTCCTTTACATTACTGTTTTAACTGTAATGGGTGTGGCTATGTCTCCCTCCAAATGCTCCACTGTGGGCGTTCAAGGCATTGCTTGGGCATTTGGTGGCATGATCTTCGCTCTTGTTTACTGTACTGCTGGTATCTCAGGGGGTCACATTAACCCAGCTGTGACATTTGGGCTGTTCTTGGCGAGGAGGGTATCAATGACTAGGGCGGTGTTCTATATAACAATGCAATGCTTGGGAGCTATTTGTGGCGTTGCAGTTGTGAAGAGGTTTCAAGGAAGCCAGTATGAGAGGCTTGGAGGGGCTGCCAATAGTGTTAGTGAAGGATACTCCATGATTAGTGGCCTTGGTGCAGAAATCATAGGCACTTTTGTGCTTGTTTATACTGTTTTCTCAGCCACTGATGCCAAACGAATCGCTCGAGATGCTCACGTCCCTATCTTGGCACCACTGTCTATTGGGTTTGCTGTGTTTGTGGTGCATTTGGCTACAATTCCTATCACAGGGACTGGGATCAACCCGGCTAGAAGTCTTGGTGCAGCACTCGTTTTCAACAAGGATCAAGCTTGGGACGACCACTGGATCTTCTGGGTGGGGCCTTTTCTTGGGGCAGGACTTGCAGCTTTGTATCATGAGATAGTGATAAGGGCCATGCCCTTCAAGCTTAAGTGA 2838 0.4454 MEIIDDGSSRAQASRSWLHHPFLLSPSAFFSWALLVSYNMVEYACVSILITFYTQQAMRDQLVEAALFLCLQEGLASLAAILIVRFTRETSGRRFYAIVISTASYIAGIMILWSYARHSPQEKKVPLFLVVSCLFALGKGGADPPLKSFLEHNLCESHQSNNIKETKSADIRKNIWIQSAWILGAIIGIFGFLGLRWVRVFQISAIVMVSSGLLFLFCANSTTRPIYQSVHRDATTVPKRERNVKWLLMLSTIGYSLVLATGNIFFQEQGTNMEPLTIKGKEVRFSVMIVIKRAVNEITILIFGLFKANKKQGIALVRIGSGMVCAIICCVIAWKVEIQRKKVVDENDTNKTSVAWLCAHYVLLGLVEGLSQSGLEELLAHDDDENQRLRNPGRLSKDMVSCVGKILGIPSILIVRRWFKNFNKDEAHLDRYYVMLAIFASVFFCIYLGVAFLYMNSCPMTQKMKVGLQGVASFAAIVLVRFTCERFGRRFFLAIVISTGSYIAGLIVLWTFARKEHREKNVPLFLVISVLFALGKGGAHPLLKSFLEHKLYECYNNKEESINRAEICKNIWVQSAWILGATIAIFGFMGLPMESRECAHYVILGLVEGLGQDGLEELLVPDDDDENETLMNPGTLSKDMLVPQDKEQEGSNGVAELPHATSRTGSKMEAEDEDVRVERKLIENHERTRDYKDPPPAPLFEPTELSSWSFYRAGIAEFVATFLFLYITVLTVMGVAMSPSKCSTVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARRVSMTRAVFYITMQCLGAICGVAVVKRFQGSQYERLGGAANSVSEGYSMISGLGAEIIGTFVLVYTVFSATDAKRIARDAHVPILAPLSIGFAVFVVHLATIPITGTGINPARSLGAALVFNKDQAWDDHWIFWVGPFLGAGLAALYHEIVIRAMPFKLK 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1114 945 Pfam Major intrinsic protein 704 933 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 SUPERFAMILY Aquaporin-like 704 938 IPR023271 -
Lele40g1114 945 SUPERFAMILY MFS general substrate transporter 176 375 IPR036259 -
Lele40g1114 945 FunFam Probable aquaporin PIP1-2 697 945 - -
Lele40g1114 945 TIGRFAM MIP: MIP family channel proteins 716 933 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 MobiDBLite consensus disorder prediction 644 674 - -
Lele40g1114 945 CDD MIP 712 936 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 Gene3D MFS general substrate transporter like domains 12 458 IPR036259 -
Lele40g1114 945 ProSitePatterns MIP family signature. 772 780 IPR022357 -
Lele40g1114 945 Gene3D Glycerol uptake facilitator protein. 697 943 IPR023271 -
Lele40g1114 945 PRINTS Major intrinsic protein family signature 754 778 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 PRINTS Major intrinsic protein family signature 791 810 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 PRINTS Major intrinsic protein family signature 840 858 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 PRINTS Major intrinsic protein family signature 712 731 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 PRINTS Major intrinsic protein family signature 876 898 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 PRINTS Major intrinsic protein family signature 916 936 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele40g1114 945 SUPERFAMILY MFS general substrate transporter 352 546 IPR036259 -
Lele40g1114 945 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 682 940 IPR034294 -
Lele40g1114 945 SUPERFAMILY MFS general substrate transporter 22 147 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1114 Lele-ChrLele40 21298753 21306732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1114 668 945 Major Intrinsic Protein MIP AT3G61430 76.140 2.41e-144 428