Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1108 ATGAACAGGGGAATTGAAGTACTCTCTCCAGCTTCCTACCTCCAGAACTCTAATTGGCTGTTCCAGGAAGGCAAAGGAACTAGATGGACTCCAGAAGAGAACAAGCGATTTGAGAACGCTTTGGCTCTGTATGATAAGGATACACCAGATCGTTGGCTGAAGGTGGCAGCCATGATCCCAGGCAAGACTGTGGGTGATGTGATCAAACAGTACAGAGAACTTGAAGAAGATGTCAGTGTCATTGAGGCAGGGCTGTTCCCAATCCCTGGCTACAGTAACAGTTCTTTCACATTGGAGTGGGTCAATGGCCAAGGCTTTGATGGCTTCAACCAATTTTATACGTCTGGTGGAAAAAGGTGTTCCCCGACCAGGCCCTCTGAGCAGGAAAGGAAGAAAGGAGTTCCATGGACTGAAGAGGAGCACAGGCAATTTCTGATGGGGCTGAAGAAGTATGGCAAAGGGGACTGGAGAAATATCTCTCGCAATTTTGTGACAACAAGGACACCTACTCAGGTTGCAAGCCATGCTCAGAAGTATTTCATCAGGCAGCTTACAGAAGGGAAAGATAAGAGGAGATCCAGCATCCATGATATCACAATGGTCAATCTCCAAGAAACCAAACCTCCTTCATCAGACAGTATCTGCAGATCACCTGCTTCTTCAAATCATCCTACAAAGGTTGTAAATCCACACCAGAATCAGAAATTATTCGGCATGGTTAAACAGGAATATTATGACATGCCAACAGTTTTCAATCCCACAAATGGGAACATGTTGTTGGCACCAATTTATGGGTTTTCTTCTCATGGAGCGAAACCACTGCAGGAGCAGTGTATGCTCAGAGGTACTCTCCATGGATTTGATCAAGGACCTTATGATACTATCCTTCAAATGCAATCAATGCAGCATCAGTGA 915 0.4525 MNRGIEVLSPASYLQNSNWLFQEGKGTRWTPEENKRFENALALYDKDTPDRWLKVAAMIPGKTVGDVIKQYRELEEDVSVIEAGLFPIPGYSNSSFTLEWVNGQGFDGFNQFYTSGGKRCSPTRPSEQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTEGKDKRRSSIHDITMVNLQETKPPSSDSICRSPASSNHPTKVVNPHQNQKLFGMVKQEYYDMPTVFNPTNGNMLLAPIYGFSSHGAKPLQEQCMLRGTLHGFDQGPYDTILQMQSMQHQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1108 304 MobiDBLite consensus disorder prediction 117 136 - -
Lele40g1108 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Lele40g1108 304 FunFam transcription factor MYB1R1 134 185 - -
Lele40g1108 304 FunFam Transcription factor SRM1 21 88 - -
Lele40g1108 304 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Lele40g1108 304 MobiDBLite consensus disorder prediction 205 229 - -
Lele40g1108 304 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Lele40g1108 304 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Lele40g1108 304 CDD SANT 28 74 IPR001005 -
Lele40g1108 304 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Lele40g1108 304 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 24 240 IPR043363 -
Lele40g1108 304 Gene3D - 21 88 - -
Lele40g1108 304 SMART sant 132 182 IPR001005 -
Lele40g1108 304 SMART sant 25 77 IPR001005 -
Lele40g1108 304 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Lele40g1108 304 CDD SANT 135 180 IPR001005 -
Lele40g1108 304 Gene3D - 134 185 - -
Lele40g1108 304 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Lele40g1108 304 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1108 Lele-ChrLele40 21235076 21236346 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele40g1108 Myb_DNA-binding 2.3e-12 CL0123