Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1076 ATGGTGGCAGAGGGCAGTGAAAGAAGCACAGAAGAGAAAAGTAGAAATGATAATAATAAGAAGCGTATTAAGTTGTTAGATGATCTGAGCTTATTGTCGTTTACTATCCCTCCAGTTTCAGCTTTTCTGTTCCCTGCCATCGTTCGAGCGTGGTTGAGAATTGAGCTGATGACAGAGCAGGCATGTCGACTGGGCACCGGTGACGGTGGTGACCTAAGGTGGCGCGGTCACCACAATTTTAATCTTGTAGTCTGGTACCTTCATTCTGGAGATCCAGTTCGTAGCTTCATCTATGGCACTCCCAGGAACTGCCACCCTCTCCTTCAGTACTTTGAGAGAGCAAAACGAGAAGACTCAGAGAGCATGTTGAGCAGTGAGAGCATTGCAGTGGATGAGCAGACTTTGGAGGAAGAGCTACATAGTGCCGTTGCAGAAGAGAACTATGCTAAAGCAGCAGAAATCAGAGATGCTCTGAACAACCTTCAGAAAGACATCAAGACCACGGTTTTAGGAGCCAACAGCCGGTTTTACGATTCATTTAGGACTGGGGATCTCGCGGCAATGCAAGCTCTTTGGGCCAGAAGAGATGAGGTATGTTGTGTGCACCCTAGTGTGAGAGGAATATCTGGTTATGATGATGTTATAGAGAGCTGGAATTTTGTGTGGGCCAACTATGAATTCCCATTGGAGATTAAGTTAGAAGACATTAAGGTTCATACTAGAGGGGATATGGGATACGTGACATGCATGGAATTTGTAAAGACAAAAGGAGGAAGATGGGGAGGACAGATTGTGACCAATGTGTTTGAGAGGATTGATGGCCAATGAATGCGTTGGGCATTAAATCAATCAAAGAACCAGCTTAAGATTCCTATACACACGACGTTATATTGGGGCCACAAGGCTTACGTGCGTTTCCCGTCCTGGCCTGGAGATAATGCTGCCATGTACGATCTAGCTTTGGTGGTATTGGTCTTGGCCATGACTGTCTTGGTGGAGTGGCTTTCTTTCACGGACATGGTGAAGCTAAAGCGCGGCAAGAATGAGGTCGTTGCTCGGATGCTCCGGTTGGCGATCTATGGCTTTCGAACCGGGCTCTATTACATGACCATGCTGGCCGTCATGTCCTTTAACGGCAGCGTGTTTGTCGCTGCCATTGTCGGTCACGTCACCGGCTTCTTGGTTTTCGGTACTCAGGCTATCTGGAGAAAGAAAGCCAGTGGGTCAGACCCTGATAAGGCATCTGACGTATGA 1254 0.4745 MVAEGSERSTEEKSRNDNNKKRIKLLDDLSLLSFTIPPVSAFLFPAIVRAWLRIELMTEQACRLGTGDGGDLRWRGHHNFNLVVWYLHSGDPVRSFIYGTPRNCHPLLQYFERAKREDSESMLSSESIAVDEQTLEEELHSAVAEENYAKAAEIRDALNNLQKDIKTTVLGANSRFYDSFRTGDLAAMQALWARRDEVCCVHPSVRGISGYDDVIESWNFVWANYEFPLEIKLEDIKVHTRGDMGYVTCMEFVKTKGGRWGGQIVTNVFERIDGQXMRWALNQSKNQLKIPIHTTLYWGHKAYVRFPSWPGDNAAMYDLALVVLVLAMTVLVEWLSFTDMVKLKRGKNEVVARMLRLAIYGFRTGLYYMTMLAVMSFNGSVFVAAIVGHVTGFLVFGTQAIWRKKASGSDPDKASDV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1076 417 Pfam SnoaL-like domain 170 281 IPR037401 -
Lele40g1076 417 SUPERFAMILY NTF2-like 163 279 IPR032710 -
Lele40g1076 417 Pfam Ctr copper transporter family 352 396 IPR007274 GO:0005375|GO:0016020|GO:0035434
Lele40g1076 417 Pfam UvrB/uvrC motif 134 163 IPR001943 GO:0005515
Lele40g1076 417 Gene3D - 159 288 - -
Lele40g1076 417 Coils Coil 144 164 - -
Lele40g1076 417 PANTHER NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN 111 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1076 Lele-ChrLele40 20988334 20995123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1076 295 399 Inorganic Solute Cotransporters AT5G59030 41.509 1.12e-22 92.4