Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1053 ATGCCTACCATTACCAACAGCTATCTTCTTCTTCTTCTCCTTCTTCCCTGTTTCTCACCATTGGTCATATGCTTTAGCCACTGTCCAGATTGTGGTGGCACCCAAGTTCCATTCCCACTTAGCACCAACACTCATTGTGGCGACCCATTTTACAGGGTTCGATGCCACAAAAGTGCCCTCTGGTTCGACACCGTCAATGGCTCCTCCTACATGATCACCACCATCGACCCCCAAACTCAGCGTTTCGTGATCCGACCGCCCAGTCTAGCCGCTAACCATACCTGCGTCTCCGCCGATTTCCGAACCCAAGGCATGTGGCTTGATACCAACGCACCCTTCAACATCAGCTCCAGCAACACCCTCATATACATGAACTGCTCCGAAGAGGTATTGGATCTCCTGTGGAATTGCTCTTCGTCCAGCATTTGTCATCGTTATGTTAAGGCCCGAGCTGCCGAGGCTTGCGGCCACAGTGACGCGGCAATATGCTGCACCTTGAAGACTGGGGGGTCGACCACGGAGTATAGAATTAGGGTGAGGAAAGAGAGGTGCGCGGCGTACGTAAGTTTTACGAATTTGGATGATTCGGCTCCAGTGAGTGAGTGGCCGGAGCCCGGGGTGGCGATAGAGTGGGAGTTACCTCAGGAGCCTGTGTGCAAGGTACAAGCAGATTGTGGTGGTTTGGAAAATTCGGCATGCTCGCCCTCGCCGGTTCCAGCTATGGGTGGCGGAGTGAGCAAGTGCTTGTGCAACTCTGGTTTTCAGTGGGATCCTGTAAACGGAATATGTCAAAATATCAAGTGTGAACAGGGAAGAGGCTGTAAGCATCGTAGTAAGAAGAAAGCTCAGCTTATCGGAGGCTTGGCATTTGCGTCGGCCGCCATGCTCACCGGAATCCTAATCACAGCAATGGTTTTTCGCTACCGGAGGCAAAGAGCAACCCAACTTTTAAGCATGAACAGAGCACTTGATATATTGAACGCCGACAACAACAGCGGCAAATCAGCTAAGATTTTCACCATCAAAGATATGACAAAAGCCACCAACAACTTCTCCAAACACAGACTCCTCGGCTCCGGCGGTTTTGGCGAGCTATCGGATAAGAGCGATGTGTACAGTTTTGGGGTGGTTCTGTTGGAGATATTGACGTCGAAGAAGGCTCTGGATTTTGGGAGAGACGAGGAAGATGTGAACTTGGTGGTGTTTGTGAAGAGGGAGATGAAGAATACGAGGTTGATGGAAGTGATTGATCCAACGGTGAAGATGGGAGCTAGTAAGTTGGAGTTAGATAGTATGAAGGCTTTGGGGTGTCTTGCGATTGCATGTTTAGACGAACAGAGGCAAAATAGGCCCTCCATGAAAGATGTTGCCGATGAGATTCAGCACATTCTTCACACTCTTTCTTCTGATACTGCCTTCAAGGTCGAACCTTTCCATGAGTTTATTCTACACTAG 1455 0.4976 MPTITNSYLLLLLLLPCFSPLVICFSHCPDCGGTQVPFPLSTNTHCGDPFYRVRCHKSALWFDTVNGSSYMITTIDPQTQRFVIRPPSLAANHTCVSADFRTQGMWLDTNAPFNISSSNTLIYMNCSEEVLDLLWNCSSSSICHRYVKARAAEACGHSDAAICCTLKTGGSTTEYRIRVRKERCAAYVSFTNLDDSAPVSEWPEPGVAIEWELPQEPVCKVQADCGGLENSACSPSPVPAMGGGVSKCLCNSGFQWDPVNGICQNIKCEQGRGCKHRSKKKAQLIGGLAFASAAMLTGILITAMVFRYRRQRATQLLSMNRALDILNADNNSGKSAKIFTIKDMTKATNNFSKHRLLGSGGFGELSDKSDVYSFGVVLLEILTSKKALDFGRDEEDVNLVVFVKREMKNTRLMEVIDPTVKMGASKLELDSMKALGCLAIACLDEQRQNRPSMKDVADEIQHILHTLSSDTAFKVEPFHEFILH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1053 484 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 364 467 IPR044652 GO:0004672
Lele40g1053 484 Pfam Protein tyrosine and serine/threonine kinase 364 459 IPR001245 GO:0004672|GO:0006468
Lele40g1053 484 Gene3D Transferase(Phosphotransferase) domain 1 344 477 - -
Lele40g1053 484 SUPERFAMILY Protein kinase-like (PK-like) 366 462 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1053 Lele-ChrLele40 20783406 20786151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1053 343 470 Receptor kinase-like Gene Family AT5G02070 51.449 1.69e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele40g1053 PK_Tyr_Ser-Thr 1.2e-06 CL0016