Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1046 ATGCCTTGCTTCGTTCTCCTTCGGATTGGTTCCTGTTTACCTACGATGGCCACCCTTCTTCTCCAACTCTCCTCTGTTTTCCTCTTCCTTCTGTTTCCTGTGTCTTCTCAGCTCGACGAGGTTTTCTTCCCCGGATTTAAGGGTGTCGGAAACAACATAACCCTGAACGGTCTAGCAGAAATCGAGAAAAATGGAATCTTGAAGTTGACGAACCAGACAAGTAGACTAATGGGTCATGCTTTTTATTCTTCTCCATTCCAGTTCAAGAGCTCGTCTTCTGGTAAAGCCTTCTCCTTCTCTGCTTCTTTTGCTCTCGTCACTGTCCCTGTGTTCTACAAGCTCGGTGGCCATGGCTTGGCTTTCACTATAGCAACTTCTAAAGAGCTCAAAGCCTTACCAAGTCAGTATCTTGGCCTCCTTAACTCCTCCGATGTCGGAAATTCCTCCAATCATTTATTCGCCGTCGAGTTCGACACCGTCCAGGACTTTGAATTCGGAGACCTGAACGACAACCATGTTGGAATCGACTTAAACAGCTTAGTCTCCAACGCATCTGAGACTGCAGCGTATTACACCGACGATTCAGGTTTAAAGAAGCAAGATCTCAATCTCTCCGGTGGGACGCCGATTATGGTTTGGGTGGATTACGATTCGGCTGCAAATCTAGTGAGTGTTACTCTGTCTCCTTCTTCTACAAAACCCAGAAAGCCACTCTTGTCTTTTCCCGTAGATCTCTCGCTAATTCTTAAAGATTATATGTATGTTGGATTCTCTGCTTCCACGGGTCTTCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGTCCAGCTCGATCTCTCGATCTCTCTTCTCTCCCACATCTTCCAGGTCCGAAGAAGCAACCGACAAAGCTCATAATCGGCGTAACGGTGCCGGTGATACTGATTACATTATCGGCGATAGCCGTCGGTATTTATTTGTTTAGAAAAATAAAAAACGCCGACATAATAGAAGCTTGGGAGCTAGAAATCGGACCCCATAGATATTCCTACGAAGAGCTCAAGAAAGCGACAAAAGGTTTCAAGGATAAGGAGCTTCTGGGACAAGGTGGGTTTGGTCGAGTTTACAAAGGAACACTCCCGAGTTCGAAAACCGAAGTCGCAGTCAAACGAATTTCCCACGAATCCAAACAGGGCCTTAGGGAGTTCGTCTCTGAAATCGCCAGCATTGGTCGGCTGCGTCACCGGAATCTCGTTCAACTTCTGGGTTGGTGTCGCCGGCGAGGCGACCTCATGCTCGTATACGATTACATGGCCAATGGGAGCTTAGACAAGTACATATTCGACCAGCCAGAAACTATTCTCACCTGGGAACAAAGGTTTAAGATCATTAAAGGTGTCGCTTCTGGTCTCCTATATCTCCACGAAGGATATGAACAAGTCGTCATTCACAGAGACGTGAAAGCAAGCAACGTTTTACTAGACAACGAGCTCAATGGAAGATTAGGAGATTTTGGTTTGGCTAGATTATACGAACACGGAGCCAACCCTAGTACGACGAGAGTGGTGGGTACATTAGGCTATTTAGCTCCTGAATTACCTCGTACTGGTCGAGCCACGACAAGCTCCGATGTGTTTGCTTTTGGTGCTCTCATGCTCGAGGTGGTTTGTGGAAGAAGACCCATTGAACCGAAAGCTTTACCAGAAGAGTTGGTTCTCGTGGATTGGATTTGGGACAAGTACAGAGAAGGGAGGTTGCTGGGAGTGGTGGATCCAAAGTTGAATGGAGAATTTAATGAAACTGAAGTAGTAATGGTGTTGAAACTAGGTTTGATTTGTTCGAATGATGTTCCTAATAACAGACCAACTATGAAGCAATTAATGATGTATTTGGAAGGAGAAGTGGAATTGCCAGAGAGTTTGAGTCTGAGAAAACCATCTGGAGGGAATCAAATCCATGAAGGGTTCGATGAGTTCTTGTTCAATTCGCTTGCGACGTCTTCGTTTGATGATAAGATGACTGCTAGTTCTTATACTGGACATTATAGAGAAACAGATGGTTCTACTCATTTTGCTTCTTTTAATACAACTTCACCTCATTCTCTTCTCCATGCCAGAGGAGAAACAAGGTGA 2124 0.4524 MPCFVLLRIGSCLPTMATLLLQLSSVFLFLLFPVSSQLDEVFFPGFKGVGNNITLNGLAEIEKNGILKLTNQTSRLMGHAFYSSPFQFKSSSSGKAFSFSASFALVTVPVFYKLGGHGLAFTIATSKELKALPSQYLGLLNSSDVGNSSNHLFAVEFDTVQDFEFGDLNDNHVGIDLNSLVSNASETAAYYTDDSGLKKQDLNLSGGTPIMVWVDYDSAANLVSVTLSPSSTKPRKPLLSFPVDLSLILKDYMYVGFSASTGLLASSHYILGWSFKINGPARSLDLSSLPHLPGPKKQPTKLIIGVTVPVILITLSAIAVGIYLFRKIKNADIIEAWELEIGPHRYSYEELKKATKGFKDKELLGQGGFGRVYKGTLPSSKTEVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLMLVYDYMANGSLDKYIFDQPETILTWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDNELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALMLEVVCGRRPIEPKALPEELVLVDWIWDKYREGRLLGVVDPKLNGEFNETEVVMVLKLGLICSNDVPNNRPTMKQLMMYLEGEVELPESLSLRKPSGGNQIHEGFDEFLFNSLATSSFDDKMTASSYTGHYRETDGSTHFASFNTTSPHSLLHARGETR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1046 707 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 296 IPR013320 -
Lele40g1046 707 Gene3D - 41 278 - -
Lele40g1046 707 PANTHER - 33 635 - -
Lele40g1046 707 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Lele40g1046 707 CDD lectin_legume_LecRK_Arcelin_ConA 43 279 IPR001220 GO:0030246
Lele40g1046 707 MobiDBLite consensus disorder prediction 687 701 - -
Lele40g1046 707 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
Lele40g1046 707 FunFam L-type lectin-domain containing receptor kinase S.1 343 434 - -
Lele40g1046 707 Pfam Legume lectin domain 43 289 IPR001220 GO:0030246
Lele40g1046 707 SMART serkin_6 358 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1046 707 Gene3D Transferase(Phosphotransferase) domain 1 435 643 - -
Lele40g1046 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Lele40g1046 707 ProSiteProfiles Protein kinase domain profile. 358 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1046 707 FunFam L-type lectin-domain containing receptor kinase S.4 37 283 - -
Lele40g1046 707 MobiDBLite consensus disorder prediction 687 707 - -
Lele40g1046 707 Pfam Protein kinase domain 358 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1046 707 FunFam L-type lectin-domain containing receptor kinase S.4 435 641 - -
Lele40g1046 707 SUPERFAMILY Protein kinase-like (PK-like) 340 634 IPR011009 -
Lele40g1046 707 CDD STKc_IRAK 364 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1046 Lele-ChrLele40 20722862 20724985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1046 34 636 Receptor kinase-like Gene Family AT3G55550 62.459 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele40g1046 Pkinase 2e-46 CL0016