Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1029 ATGTTTAAGTTTATGGCCTTGGTGCTTTTGCTGGTGGCAGCAACAATAGTCCTAGTAGTGAGTGGCACAGATACAAGTTTCATCTTTAACTATGGATTCCAATCTGCTAATTTAGCCATGGATGGTGTTTGTTCTGTTACCTCCAATGGCCTCCTCCTACTCACCAACCAAACCAGGCTGCAAATGGGTCATGCATTTTACCCTAATCCAATCCTTTTCACAAACACTTCTTCTTTCTCTACCACCTTCGTTTTCGCCATTAGACCTTTATATCCAACTCTGGGTGGTCATGGATTGGCTTTTGTGATAGCTCCAACTACAGCAGCATTTCAAGGCGCCATTGCCGGCCAGTACCTCGGCCTCTTCAATGAAAGCAACAACGGCAACTCCACAAACCATGTGCTTGCAGTGGAAATCGACACCAGCCAGAACAAAGAGTTTGATGATATCAATGATAACCATGTTGGAATCGATATCAACGACTTGAATTCTACGAAATCTGCTCCTGCTGGATATTATGTTAATGGGTCAGGGTTTCAGAATCTAACCCTTAACACTGGCCTTCCAATGCAAGTGTGGGTGGACTATGACGGAGGCAAGAAGCAAATTGACGTCACCCTAGCTCCAATCAACGTTAACAAGCCCGAAACTCCATTATTGAGGTTGTCCCAGGATCTTTCAAATATTATAAAAAATACTAGTTATGTCGGATTCTCAGCGGCCACTGGGTCAGTGATGACTTCTCATTATGTTCTTGGTTGGAGCTTCAAGCTCAACGGGGAGGCACAAAACCTTCAATTCTCAAAACTCCCCAAACTTCCACAACTTGGAGGAAACAAACGATTTGTGATTTTAACAGTTGTGTTACCTCTGTTGTCACTTTGTTTCATATTTTTGGTGATTTTATCGATCATTTATTTCAAATATAGGAAGAGGAAATTTTCTGAGATTGTGGAGGAGTGGGAGCAAGACTATGGTCCTCACAGGTTCAAATACAGAGATCTCTACATTGCCACAAAGGGATTCAGAGAGAAAGAGCTTCTCGGCAGTGGTGGTTTTGGCAGAGTCTACAAAGGGGCAATGCGTGGTTCCAAAATTGAGGTTGCTGTGAAGAAAGTCTCCCATGAATCCCGACAAGGTATGAGGGAATTCATAGCAGAAATCGTGAGCATTGGTCGTCTACGCCATCGAAACCTGGTATCTCTCTTGGGATATTGCAGGCGAAAAGGTGAGCTTCTTTTGGTTTATGATTTCATGCCAAATGGAAGCTTAGATAAATACCTCTACAACCAGCCCACAGTGACACTGAATTGGATGCAAAGGTTTAGAATCGTCAAAGGCGTAGCTTCGGGATTGTGCTATCTGCATGAAGAATGGGAGCAAGTTGTGGTTCATAGAGACATAAAAGCAAGCAATGTTCTGCTAGATTCGGAGTTCAATGGCAGGTTAGGAGATTTTGGTCTTGCAAGATTATACGATCATGGGAGCGACCCAGCAACTACACATGTGGTGGGGACCTTGGGATATCTGGCACCAGAGAACACAAGAACAGGGAAAGCCACAACAAAGTCCGATGTTTTTGCTTTTGGTGCGTTTTTGCTAGAGGTTGTATGTGGGAAAAGGCCTATAGAGAGAGGAAGTGAAGAATTCATTTTGGTGGATTGGGTTTATGGGTTATGGAAGAAGGGTGAGATTATTGAGGTAAAGGATGAAAATTTAGGAAGAGATTATAACATAGAGGAGGTAGAATTAGTGTTGAAATTGGGGCTTCTGTGTTCGAATTATAAGGCAGGGGAAAGGCCAAGGATGCGCCAAGTTGTGCAGTATCTGAATATGGAAGTGCCATTGCCTGATCTGCCATTGCTAACGATGTCGTCTCCTTCATGTTGTGGATTTACAACAGAGTTTGAAGACACTGGAATGTCGTTTCCATCTTCAAGTGTGGTCGTCGATGGCTATTTATCTCGCACTTCAATACCTGAATCCATTCTCTCTGGAGGTCGCTGA 2007 0.4345 MFKFMALVLLLVAATIVLVVSGTDTSFIFNYGFQSANLAMDGVCSVTSNGLLLLTNQTRLQMGHAFYPNPILFTNTSSFSTTFVFAIRPLYPTLGGHGLAFVIAPTTAAFQGAIAGQYLGLFNESNNGNSTNHVLAVEIDTSQNKEFDDINDNHVGIDINDLNSTKSAPAGYYVNGSGFQNLTLNTGLPMQVWVDYDGGKKQIDVTLAPINVNKPETPLLRLSQDLSNIIKNTSYVGFSAATGSVMTSHYVLGWSFKLNGEAQNLQFSKLPKLPQLGGNKRFVILTVVLPLLSLCFIFLVILSIIYFKYRKRKFSEIVEEWEQDYGPHRFKYRDLYIATKGFREKELLGSGGFGRVYKGAMRGSKIEVAVKKVSHESRQGMREFIAEIVSIGRLRHRNLVSLLGYCRRKGELLLVYDFMPNGSLDKYLYNQPTVTLNWMQRFRIVKGVASGLCYLHEEWEQVVVHRDIKASNVLLDSEFNGRLGDFGLARLYDHGSDPATTHVVGTLGYLAPENTRTGKATTKSDVFAFGAFLLEVVCGKRPIERGSEEFILVDWVYGLWKKGEIIEVKDENLGRDYNIEEVELVLKLGLLCSNYKAGERPRMRQVVQYLNMEVPLPDLPLLTMSSPSCCGFTTEFEDTGMSFPSSSVVVDGYLSRTSIPESILSGGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1029 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 275 IPR013320 -
Lele40g1029 668 ProSiteProfiles Protein kinase domain profile. 342 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1029 668 Gene3D - 23 272 - -
Lele40g1029 668 SMART serkin_6 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1029 668 SUPERFAMILY Protein kinase-like (PK-like) 323 635 IPR011009 -
Lele40g1029 668 Pfam Legume lectin domain 25 271 IPR001220 GO:0030246
Lele40g1029 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Lele40g1029 668 ProSitePatterns Legume lectins beta-chain signature. 135 141 IPR019825 -
Lele40g1029 668 ProSitePatterns Protein kinases ATP-binding region signature. 348 372 IPR017441 GO:0005524
Lele40g1029 668 CDD lectin_legume_LecRK_Arcelin_ConA 25 260 IPR001220 GO:0030246
Lele40g1029 668 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Lele40g1029 668 CDD STKc_IRAK 348 611 - -
Lele40g1029 668 PANTHER - 18 615 - -
Lele40g1029 668 FunFam L-type lectin-domain containing receptor kinase S.4 419 622 - -
Lele40g1029 668 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Lele40g1029 668 FunFam L-type lectin-domain containing receptor kinase V.9 24 263 - -
Lele40g1029 668 Pfam Protein kinase domain 342 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g1029 668 Gene3D Transferase(Phosphotransferase) domain 1 419 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1029 Lele-ChrLele40 20622905 20624911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1029 21 668 Receptor kinase-like Gene Family AT2G37710 59.574 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele40g1029 Pkinase 4.4e-47 CL0016