Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1025 ATGGTTGACTTCTCAACCATTTCAGAGTCAGTAATGACGGAGGAAGCAGGAATGGCAGCTTATTCTTCAGATGGGTCAGAAGAAGATGACCTCTTCAGAGAGCTTTTAGATTATAACAATCATTATGAACCGTCTCCTTTCTTCTCCTGCATTGAAGAACCCATCAAAATAAAAACATCATCAGGTTCCACCATTAACTCCTTCGTCTCCAACATTTATTCAGGACCTACCATTTCTGACATTGACAACGCCTTGTCGTTCACCAACCACAAACAACATTCCCACCAAGACGTCTCCATTTCCAGGGTTTCGGTACTGGAGAGAGGACTGAGCAATATAGCGAATAATTATACACTGAAAATGAAGTGCTTTGGGAATGGCATGGGTGATGATGGATATAAGTGGAGGAAGTACGGTCAGAAATCTATTAAGAATAGTCCAATTCCTAGGGTAAGAGGAGAGGACCAGGCCCATCAGGGCCCACAAGCACAGGAATCTGATCAGGCCCAGGCCCATGAGATTAGTGTGGGATCGCAAGGGTTCCTTGAAGACATGGTGCCTTTGAGGATTAGAAATCCTACAATTAGAAGTTGA 594 0.4377 MVDFSTISESVMTEEAGMAAYSSDGSEEDDLFRELLDYNNHYEPSPFFSCIEEPIKIKTSSGSTINSFVSNIYSGPTISDIDNALSFTNHKQHSHQDVSISRVSVLERGLSNIANNYTLKMKCFGNGMGDDGYKWRKYGQKSIKNSPIPRVRGEDQAHQGPQAQESDQAQAHEISVGSQGFLEDMVPLRIRNPTIRS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1025 197 Gene3D WRKY domain 125 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele40g1025 197 MobiDBLite consensus disorder prediction 144 178 - -
Lele40g1025 197 SMART WRKY_cls 129 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g1025 197 Pfam WRKY DNA -binding domain 130 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g1025 197 ProSiteProfiles WRKY domain profile. 124 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g1025 197 SUPERFAMILY WRKY DNA-binding domain 127 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele40g1025 197 MobiDBLite consensus disorder prediction 159 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1025 Lele-ChrLele40 20592714 20595003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1025 66 150 WRKY Transcription Factor Family AT5G43290 56.977 1.57e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele40g1025 WRKY 4.3e-07 CL0274