Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0999 ATGTCAAGAGCAGGGTCATCAAGATGGAGTCCAACCCCAGAACAACTGATGATTTTGGAGGAACTATATAGGAGTGGGATTAGAACTCCTAGTGCTTCCCAAATCCAACACATAACAACTCACCTTTGTTTCTATGGTAGGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCACAAGGCTAGAGATAGACAGAAGCTCAGGAGGAAACTAAACAAGCAGCTCCAACTTCAACAACAACATCAGATGCTAACAGCCCATCAATGCCAAGTGATTAATCAGGATAAGACTCATCACTGGTTTTTTGGTGGCTTTGATTCTTCTCCCGGTTCTTGTTCTTCTTCTGCCCAACAAGTTTCTTTTTATAACCCAGCTTTCTTGCTTTCTCTGGGAGAAACAGGAGAGACAATATCAGAGACATGGAATAAGACTGCGCAGAAGCAAGAAAGTGAGGTGAATAAAACAAAGACGTCGTCGTCATCACTTTACAACTATGGTATGAATTGTTGGAGATTTGCGGATGTTAATGAAGAAGCATCCTCATCATGTTGCAGTCCAAGAGGGCCTCCTCTCAAGACTCTTGACCTCTTTCCAACTACTTCCACCAAACTCAAAGAAGACCCCTTTACCCCAAAACTCTGA 645 0.4217 MSRAGSSRWSPTPEQLMILEELYRSGIRTPSASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQHQMLTAHQCQVINQDKTHHWFFGGFDSSPGSCSSSAQQVSFYNPAFLLSLGETGETISETWNKTAQKQESEVNKTKTSSSSLYNYGMNCWRFADVNEEASSSCCSPRGPPLKTLDLFPTTSTKLKEDPFTPKL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0999 214 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Lele40g0999 214 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Lele40g0999 214 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Lele40g0999 214 CDD homeodomain 8 67 IPR001356 GO:0003677
Lele40g0999 214 Gene3D - 1 67 - -
Lele40g0999 214 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 206 IPR044555 GO:0003700|GO:0099402
Lele40g0999 214 FunFam WUSCHEL-related homeobox 4 6 73 - -
Lele40g0999 214 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0999 Lele-ChrLele40 20419007 20420198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0999 1 74 Wox Gene Family AT2G28610 82.432 4.46e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele40g0999 Homeodomain 6.6e-18 CL0123