Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0976 ATGGAAGTTCTCACTTCTATTGCTGGAAAAATAATAGAGTTAACTGTGATACCCATTGGAAGGCAAGTGGGATATTTATTATTTTACAAAGAAAACTTTAAGGAGCTGAATTATAAAATTGATGAGCTGAAGGCAAAAAAAGTTCGCATCGAGCATGATGTGAATGAAGAAAGAAGGAAAGGAAGAGAGATTGAAGATGATGTAAACATTTGGCAAAAAAGAGTTGAAGAGACCTTGAAAGAAGGAGAGAAACTTTGTGAAGGAGAACCTCATGCAAGTGTACGGTGTTGGAAATGCTCTTTTCCTAATTTGATATCACGACATCAACTTGGAAGAAAAGCAAAGAAAATGGCATTCACCCTTGCTGAGCTAGAGCAAAAGAAGTTTGATGGTGGAATTGGACATGTTCCTGCTTCTAGCTTAGCAAACTTAATATTTGTTGCTCGAGGTAGTGAAAAGCTTGAGTCAAGAAACTCAGCGAAGGAGAAAGTTGTGTTGAGCCTGACCGACCCAAAAGTAAGCAAAGTTGGAATTTATGGGTTGGGTGGTGTAGGAAAGACCACTCTAGCTAAAGAGGTTGCCAAACATGTTAACGATCAAAAGCTGTTTGATGTGGTGGCTATGGTAACTATATCCCAAACTTGGGACGTTAACAGAGTTCAAGATGAAATTGCATATCAATTAGGCTTTCCCTTGGACGAGAAGGCCCCAATTGGAAGAGCCGACCGGCTGTGTAAAAGGATAAAAATGGAGAAGAGTATCCTTATCATACTTGATGACTTATGGGAGGAAATTGATTTGGACAAGTTGGGAATTCCTTCTGAGCAAGATCTTAAGGGTTGCAAATTATTGTTGACTTCTAGAAGTTTGGATATTCTACAGAAGAATGATACTCAAAGGAACTTGGCTCTTCAAACATTGGATGAAGTAGAATCATGGAGTTTGTTTGAAGATATTGTTGGTGATGCTATTAAAGATGCAAAATTGAAAGAGATAGCAACTCAAGTGGTTGAAAGATGTGCAGGTTTGCCTTTTATGATAGTCTCAATTGCAAAGTCATTAAAATATAATAACAATATTTATTACTGGGAAGATGCCTTGAACAACTTAAAGAGAGTTGAGAATGGAGACATGTATGGAACTGTTCTTTCAGCCTTTGAATTTACTTACAATCGATTGGAAGATGATGAAATGAAGAAAGTGTTCTTGCTTTGTGGTGTGTATGGACTATCCATGTCGGTTAGCGACTTGCTGAAATATGTAATTGGTTTGGATGTTCTGAAACATAAAGATACCGTTAAAGTTGCAAGAAATCGACTACATAGAATAATTCATGACTTGAAGGCTTCTTGTTTGTTACATGAGGATGATGATGCGACAGAGACTGATGCGATTAAAATGCATGATCTTGTTTATGAAGTGGCTATTTCTATTGCTCATAAGAATGAACATGCTTTTGTGTTAAAAAGAAATGATGACAGGATGCAAGATTGGCCGAGCACGGATTTTCTTAAGAAATGTACCCAGATAATCTTAAGACCATATGAAGTCATAGGAATTTTGGATGTGCTTTTCGAATTGAATGGCGAAGGATTTCCTCTACAAAAGCATCTCCATATCCAAAATAATGGCCAAGTTCAACATATTATCAACACAATGCAAAGGAATGAAACTCCTGTTTTGTTCCCAAAATTGGAGACGCTAACACTTCACAATCTCAATAACTTAGTGAAGATATGTCACGGCCCACTTCCGGATAATTCGTTTGCCAAACTCACTGTCATCAAAGTTAAAAGTTGTGACCAACTGGTATATCTCTTCTCTGGTTTAATGGTGAAAGCTCTTTCTCAACTCGTTCAGATTGAAGTTTCCGAATGCAGTTCAATGAAAAGGATTGTGCTAACTGAAAATGAGGATAGTGGCATAGCTACAGAAGACAAGATTGAGTTTTATTCACTACGCGCCTTAAGTCTCTGTAAACTGCTTCTTGTTTCTTGTTCATTTCTTGATTTGCAATTTAAATTAAATGACTGCACATCACATGTCATGACGATCATGACTATAGACAACATGTTCGAGGATATGGTGGCATTTAGGAGATTCAAATATCTGGAGCTATCAAAATATCCAGAATTGAAAGAACTATGGTATGGTCAAGTTGGACAGAAAATATTCTGCAATTTAAAACATCTAGTGGAAATTCAAGAAAGAGATGAGGGCAAATATAAGGAATCTTCAAGTGATATTACAAAAAGTAGTCAAACTCATCAAATGAGTGCAAGCACTACTGGAGCATCAAACTCCGAGGAACAAGTAGGACAAACAAAGCCTAATCAGATTGTAGATATTGGGAATCAAGAAATAGGCAAGCTTCCAAGTCAATCTTATGATAGAGAGGACGATGAGGAAACCTCGTCAGGTATTGAGAGGCCTCTGACTCAGAATTCTTAG 2451 0.3729 MEVLTSIAGKIIELTVIPIGRQVGYLLFYKENFKELNYKIDELKAKKVRIEHDVNEERRKGREIEDDVNIWQKRVEETLKEGEKLCEGEPHASVRCWKCSFPNLISRHQLGRKAKKMAFTLAELEQKKFDGGIGHVPASSLANLIFVARGSEKLESRNSAKEKVVLSLTDPKVSKVGIYGLGGVGKTTLAKEVAKHVNDQKLFDVVAMVTISQTWDVNRVQDEIAYQLGFPLDEKAPIGRADRLCKRIKMEKSILIILDDLWEEIDLDKLGIPSEQDLKGCKLLLTSRSLDILQKNDTQRNLALQTLDEVESWSLFEDIVGDAIKDAKLKEIATQVVERCAGLPFMIVSIAKSLKYNNNIYYWEDALNNLKRVENGDMYGTVLSAFEFTYNRLEDDEMKKVFLLCGVYGLSMSVSDLLKYVIGLDVLKHKDTVKVARNRLHRIIHDLKASCLLHEDDDATETDAIKMHDLVYEVAISIAHKNEHAFVLKRNDDRMQDWPSTDFLKKCTQIILRPYEVIGILDVLFELNGEGFPLQKHLHIQNNGQVQHIINTMQRNETPVLFPKLETLTLHNLNNLVKICHGPLPDNSFAKLTVIKVKSCDQLVYLFSGLMVKALSQLVQIEVSECSSMKRIVLTENEDSGIATEDKIEFYSLRALSLCKLLLVSCSFLDLQFKLNDCTSHVMTIMTIDNMFEDMVAFRRFKYLELSKYPELKELWYGQVGQKIFCNLKHLVEIQERDEGKYKESSSDITKSSQTHQMSASTTGASNSEEQVGQTKPNQIVDIGNQEIGKLPSQSYDREDDEETSSGIERPLTQNS 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0976 816 MobiDBLite consensus disorder prediction 742 816 - -
Lele40g0976 816 MobiDBLite consensus disorder prediction 747 792 - -
Lele40g0976 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 405 IPR027417 -
Lele40g0976 816 FunFam Probable disease resistance protein At1g61300 146 300 - -
Lele40g0976 816 Coils Coil 26 60 - -
Lele40g0976 816 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 503 661 - -
Lele40g0976 816 MobiDBLite consensus disorder prediction 793 807 - -
Lele40g0976 816 SMART AAA_5 172 308 IPR003593 -
Lele40g0976 816 Gene3D - 143 303 IPR027417 -
Lele40g0976 816 Pfam NB-ARC domain 161 391 IPR002182 GO:0043531
Lele40g0976 816 PRINTS Disease resistance protein signature 340 354 - -
Lele40g0976 816 PRINTS Disease resistance protein signature 175 190 - -
Lele40g0976 816 PRINTS Disease resistance protein signature 248 262 - -
Lele40g0976 816 PRINTS Disease resistance protein signature 613 629 - -
Lele40g0976 816 Gene3D - 306 394 IPR042197 -
Lele40g0976 816 Gene3D Ribonuclease Inhibitor 531 639 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0976 Lele-ChrLele40 20209726 20218997 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0976 176 447 WRKY Transcription Factor Family AT5G45050 24.150 3.35e-07 52.4