Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0966 ATGAGTTGCTTCGCATGTTTTTCTTCACACACAGAAAAGAGATTGTCAAAGAAAAATGGAAAGAATACAGACTTGTCTCCATCTACAACTTCTGTTACATTAGAAGCCTCTACACAGCCACGCCATGAAACTCAAAACCCTAATCCCAAGCCCACTTCACAGCCGACGACAGAAGCTGAAACAAATAAGGATGCCATCAAAGACATTGACGGCAATAACAATATTGCTTCACAGAACTTTACCTTCCGAGATCTAGCGGTGGCAACAAAGAACTTCAGGAAAGAAACCCTAATTGGTGAAGGTGGATTCGGAAGGGTTTATAAAGGGCGAATAGAAAAAATCAACCAGGATGTAGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAATAGAGAGTTCCTTGTTGAAGTGTTGATGTTGAGCCTCTTACATCATGAAAATCTAGTGAATCTAGTTGGTTATTGTGCTGATGGAGATCAGAGACTTTTGGTATACGAGTACATGCCATCTGGATCTGTAGAGGATCGTCTTCTTGATGTGTCTCTTGATCAAAAGCCACTAGATTGGAATCAAAGGATGAAAATAGCCTTGGGAGCTGCAAAAGGGTTAGAATATTTGCATGACAAGGCGAATCCGCCAGTGATCTATAGGGACTTGAAAGCGGCCAACATCTTGCTAGACAAGGATTTCAATGCAAAACTTTCAGATTTCGGACTAGCCAAGCTTGGACCCATGGGAGACAAGTCCCATGTTTCTACTAGAGTCATGGGAACTTATGGATATTGTGCTCCTGAATATCAACGAACAGGTCAACTCACTGTAAAATCAGACGTCTATAGTTTTGGAGTTGTCTTGCTCGAATTGATCACCGGAAAAAGAGTCATTGACACCACAAGATCCACACGTGAACAAAACCTTGTCACTTGGGCACAACCAATGTTCAAGGAGCCTCATAGACATGCAGAACTAGCAGATCCTCTTCTGAAAGGGAACTTCCCTTCGAAAGCACTGAACCAAGCAGTGGCAATGGCAGCCATGTGCCTGAACGAGGAAGCTTCTGCGAGGCCATTAATGAGAGATGTAGTGAGTGCCCTTAGCTTCCTTGGGACAGACAATATTAATGATTCTGAAGCAGGAGGATGA 1146 0.4311 MSCFACFSSHTEKRLSKKNGKNTDLSPSTTSVTLEASTQPRHETQNPNPKPTSQPTTEAETNKDAIKDIDGNNNIASQNFTFRDLAVATKNFRKETLIGEGGFGRVYKGRIEKINQDVAVKQLDRNGFQGNREFLVEVLMLSLLHHENLVNLVGYCADGDQRLLVYEYMPSGSVEDRLLDVSLDQKPLDWNQRMKIALGAAKGLEYLHDKANPPVIYRDLKAANILLDKDFNAKLSDFGLAKLGPMGDKSHVSTRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGKRVIDTTRSTREQNLVTWAQPMFKEPHRHAELADPLLKGNFPSKALNQAVAMAAMCLNEEASARPLMRDVVSALSFLGTDNINDSEAGG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0966 381 Gene3D Transferase(Phosphotransferase) domain 1 169 378 - -
Lele40g0966 381 SMART serkin_6 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0966 381 MobiDBLite consensus disorder prediction 10 60 - -
Lele40g0966 381 MobiDBLite consensus disorder prediction 21 60 - -
Lele40g0966 381 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Lele40g0966 381 FunFam Serine/threonine-protein kinase PBS1 169 380 - -
Lele40g0966 381 SUPERFAMILY Protein kinase-like (PK-like) 78 372 IPR011009 -
Lele40g0966 381 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0966 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lele40g0966 381 CDD STKc_IRAK 98 366 - -
Lele40g0966 381 PANTHER OS07G0668900 PROTEIN 3 375 - -
Lele40g0966 381 FunFam Serine/threonine-protein kinase PBS1 62 168 - -
Lele40g0966 381 Pfam Protein kinase domain 93 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0966 381 Gene3D Phosphorylase Kinase; domain 1 63 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0966 Lele-ChrLele40 20093884 20095845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0966 1 371 Glycoside Hydrolase AT3G07070 70.081 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele40g0966 Pkinase 1.4e-48 CL0016