Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0964 ATGAAGACGAAGCTTCTTAGTAGGGCATGGCGGCTAAAATATTTTCACGATGAAACTTCGATGGCATTACTTCTTGGGATATGTTACTCTGAGCTAAAACAAGCAACAAAAGGGTTCACAGAAGAAATTGGAAGAGGAGCGAGTGGAATAGTGTACAAAGGAGTATTGCCAGATCAGCGAATCGCTGCAATAAAGAAGCTGAATAATGACAATATTGGAGCCAAACGAGATGAAGCGGAATTCCTAGCTGAAGTGAGCATAATCGGTAAGCTTAACCACATGAACTTGATCGAAATGTGGGGTTATTGTGCTGAGGGAAAGCATAGGCTATTGGTTTACGAGTTCATGGAGAAAGGTTCTTTAGCAGAAAATCTCAAATCAAACACTCTAGATTGGACCAAAAGATTCAACATCGCCCTCGGAACAGCAAGGGTTCTAGCTTACTTGCACGAAGAATGCTTGGAATGGATTCTGCATTGTGACATAAAGCCTCAGAATATTCTTCTGGATTCAAATTACCAACCAAAGGTAGCAGATTTCGGCTTATCTAAGCTTCTCAATCGGAATGACCAAAGCACTCAAAGCTTCTCAGTTATAAGAGGAACGAGGGGATATATGGCACCTGAATGGGTTTTCAATTTGCAAATAACGTCAAAGGTGGATGTGTATAGCTATGGGATTGTTGTGTTGGAGATGATAACAGGAAGGAGTGTGATGATGATGGGAAGTGGGAGTGAGGTAGGAGAAGAGGCAATGAATGGGGGGCTTGTGGCATGGGTGAGAGGGAAGAGGAAGAAAACGACGTCGGAGGAAGGGTCGTTGTCATCGTGTTGTTGGGTGGAGCAAATAATTGATGCAGGCATAATTGGATCAGAGTTGGAGGTTGAGAACATGAAGAAAATGGAAACTTTGGCCAGAGTGGCATTGGAGTGTGTGGAAGAAGACAGGGATGCGAGGCCCAGCATGAGTCAAGTTGTTGAGATGCTTCAAAGTCATGATGATGCTTCTTCTTCTTCTTCTTAG 1023 0.433 MKTKLLSRAWRLKYFHDETSMALLLGICYSELKQATKGFTEEIGRGASGIVYKGVLPDQRIAAIKKLNNDNIGAKRDEAEFLAEVSIIGKLNHMNLIEMWGYCAEGKHRLLVYEFMEKGSLAENLKSNTLDWTKRFNIALGTARVLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLLNRNDQSTQSFSVIRGTRGYMAPEWVFNLQITSKVDVYSYGIVVLEMITGRSVMMMGSGSEVGEEAMNGGLVAWVRGKRKKTTSEEGSLSSCCWVEQIIDAGIIGSELEVENMKKMETLARVALECVEEDRDARPSMSQVVEMLQSHDDASSSSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0964 340 FunFam S-receptor-like serine/threonine-protein kinase 13 115 - -
Lele40g0964 340 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Lele40g0964 340 PIRSF ILK 28 286 - -
Lele40g0964 340 PIRSF ILK 292 339 - -
Lele40g0964 340 SUPERFAMILY Protein kinase-like (PK-like) 19 329 IPR011009 -
Lele40g0964 340 ProSiteProfiles Protein kinase domain profile. 37 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0964 340 FunFam Putative receptor-like protein kinase 116 337 - -
Lele40g0964 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Lele40g0964 340 Gene3D Transferase(Phosphotransferase) domain 1 116 339 - -
Lele40g0964 340 SMART serkin_6 37 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0964 340 Pfam Protein kinase domain 40 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0964 340 Gene3D Phosphorylase Kinase; domain 1 6 115 - -
Lele40g0964 340 PANTHER OS07G0415500 PROTEIN 28 332 - -
Lele40g0964 340 CDD STKc_IRAK 43 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0964 Lele-ChrLele40 20075031 20078754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0964 5 340 Receptor kinase-like Gene Family AT1G56120 37.644 2.05e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele40g0964 Pkinase 8.5e-56 CL0016