Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0951 ATGGGCAAAACAAACAAGAGTTCATGGGCCATGAGCATGAAGCTATGGTGGATGTTTGGGTTTGTAGGACTGGTGATTATCAAAGTGGTCGAGGGTTTTGACAATGTCAGTGTGACAGATATGGATTATGTCAAGAGAAGGGGTTTCAATTACAGGCCCTTAGTGGTGGGTATCACTCTTATTAATGGAGCTGCTGCCAAAGGCGCAGTTTGCCTGGATGGATCTTTACCAGCTTACCATCTTCACCGTGGTTATGGTTCTGGATCAAATAGTTGGCTTATACAATTGGAGGGAGGAGGCTGGTGTGGAAATATCAAAACTTGTGAGTACAGTAAGAGAACTCGCCATGGTTCTTCCAATTTCATGGAAAAGCAGATTCCATTTGTTGGAATATTGAGCAACAAAGCTGAAGAGAACCCTGATTTTTTCAACTGGAATAGAGTAAAAATTCGTTACTGTGATGGTTCATCCTTTAGTGGGGACAGTCAAAATAAAGCAACAAATTTGTACTTCAGAGGACAACGCATCTGGGAAGCTGCTATGGAGGATTTAATGTCAAAGGGCATGCGCTACGCTAAACAGGCTCTTCTGTCTGGATGTTCTGCTGGAGGTTTAGCATCTATACTTCATTGTGACGAATTCAGGGGACTGTTTCCGGCAACTACAAGAGTCAAATGCTTAAGTGATGCTGGATTGTTCCTTGATAGTGTTGATGTATCTGGCAGTCGCACTTTGAGGAGGACATTCAGAGATGTGGTTGCCTTACATGGAGCAGCAGGGAGCCTTCCAAGGAGCTGTACCAGTCACTTCAATCCAACTTTGTGCTTCTTCCCTCAGTATTTAATTTCCAGTGTCAGGACACCGCTATTTATTCTCAACACAGCTTATGATACTTGGCAGATTCAAGCCAGCATAGCGCCGCCATCAGTGGATCGTCGTTGGAATTGGGCTCAGTGCAGAAAAAATTATGCCCGTTGCAGTGTATCACAGATTCATTATCTTCAAGGATTCCGAAATCAAATGCTTAATTCTGTGCGGGGCTTTTCAAGGGCTCGCAAAAATGGATTGTTCATAAACTCATGTTTCGCGCATTGTCAGACTGAAAGACAGGATACTTGGTTTGCCGACAATTCTCCCCATATTGGAAACAGAGGGATTGCACAATCTGTTGGAAACTGGTTTTTTGACAGAGTTGGAATACAGGCTATTGGTTGTGCTTACCCTTGTGAAAAAACCTGCCATAATTTGGTCTTTCAGTGA 1260 0.4341 MGKTNKSSWAMSMKLWWMFGFVGLVIIKVVEGFDNVSVTDMDYVKRRGFNYRPLVVGITLINGAAAKGAVCLDGSLPAYHLHRGYGSGSNSWLIQLEGGGWCGNIKTCEYSKRTRHGSSNFMEKQIPFVGILSNKAEENPDFFNWNRVKIRYCDGSSFSGDSQNKATNLYFRGQRIWEAAMEDLMSKGMRYAKQALLSGCSAGGLASILHCDEFRGLFPATTRVKCLSDAGLFLDSVDVSGSRTLRRTFRDVVALHGAAGSLPRSCTSHFNPTLCFFPQYLISSVRTPLFILNTAYDTWQIQASIAPPSVDRRWNWAQCRKNYARCSVSQIHYLQGFRNQMLNSVRGFSRARKNGLFINSCFAHCQTERQDTWFADNSPHIGNRGIAQSVGNWFFDRVGIQAIGCAYPCEKTCHNLVFQ 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0951 419 Pfam Pectinacetylesterase 54 397 IPR004963 GO:0016787
Lele40g0951 419 PANTHER NOTUM-RELATED 30 415 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0951 Lele-ChrLele40 19988205 19993455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0951 55 419 Carbohydrate Esterase AT1G57590 68.767 0.0 548