Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0944 ATGCCATTAGCCGATAGCCATCGAGAATCATCTCTAGCCGGATTAACTCTCCACGATGTGTTAGCCAACCGAGCCGCCACGTCGAGCCAGCAACAACTCACAAACAACCGTCGAACCCTCCTTGACATTATCCGCGAAGACGAATCCTCCAAAAACGATCCCAAGCCTTGGAAGGCCCTCAAAGACAAGCTTCGGCTCAAACGCGCCGGATCTGCTTGGACTTCCTCCGTCCTTATCCCAGCTTCGGATATCCCTATCCCTGTCAGGAATAACAGAAACCTTTACCCGCAGTTCCCCCGTGGAAGCTCCGTCCAAATCCTTACATTCCCCCCCGTGGACGAGCCGAGTCACACCATGGCCGATCCCACCGAAGAAGCCATCAAGAGTTCCAACCTCCCCAACAACTCGCGCCAGAGATCCACGCGCCAGGTCGGGGATACCGTTTTCGTCGACGATAAACTCAAGCCCCAGATGTCCCGCCCGAACTCCGCACGTCTGGCGGCTGCAGTGCGAGCTGATTCCATCCGGAGAGAGCGCGTGGTGACCTTTCGTGATCCTGACAGCGATGACGACGAGGATGGAGACGGCCACCGCCAGCCGAAGGAGGTGAGGCAGATGTCTGCAAGGGAAGCTGTGGCAGCGCAGGAAGCGGCGGAGGCGGCGGCGATGGCGGAAGATGAGGAAGAGGAGGAAGATGAAGACGACGAACCGTTCGGGGGTGGGGGAGGCGGTGTGACAATGTCGCTGATGGACTTGTTGGAGGAAACAGATCGGCAAATGGGGTTCGAAGGATCGAAGTACAGAATGGAAGATGACGACGACGAGTATTTCGATGAGGATGAAGACGAAGACGATGACGAAGGAGGTGAGGAGCACGATTGCTGCGTGTGCATGGTGAAGCATAAAGGTGCGGTTTTTGTGCCGTGTGGGCACTCGTTTTGCAGAATGTGTTCAAGGGAGCTCACTGTGAGCAAGGGAAATTGTCCTATCTGCAACAATTTCATCTTGGAGATTCTTGAGGTTTTCTGA 1029 0.5549 MPLADSHRESSLAGLTLHDVLANRAATSSQQQLTNNRRTLLDIIREDESSKNDPKPWKALKDKLRLKRAGSAWTSSVLIPASDIPIPVRNNRNLYPQFPRGSSVQILTFPPVDEPSHTMADPTEEAIKSSNLPNNSRQRSTRQVGDTVFVDDKLKPQMSRPNSARLAAAVRADSIRRERVVTFRDPDSDDDEDGDGHRQPKEVRQMSAREAVAAQEAAEAAAMAEDEEEEEDEDDEPFGGGGGGVTMSLMDLLEETDRQMGFEGSKYRMEDDDDEYFDEDEDEDDDEGGEEHDCCVCMVKHKGAVFVPCGHSFCRMCSRELTVSKGNCPICNNFILEILEVF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0944 342 MobiDBLite consensus disorder prediction 272 290 - -
Lele40g0944 342 MobiDBLite consensus disorder prediction 125 247 - -
Lele40g0944 342 MobiDBLite consensus disorder prediction 261 290 - -
Lele40g0944 342 Pfam Zinc finger, C3HC4 type (RING finger) 291 335 - -
Lele40g0944 342 MobiDBLite consensus disorder prediction 221 238 - -
Lele40g0944 342 SMART ring_2 294 331 IPR001841 -
Lele40g0944 342 Coils Coil 214 234 - -
Lele40g0944 342 MobiDBLite consensus disorder prediction 125 145 - -
Lele40g0944 342 ProSiteProfiles Zinc finger RING-type profile. 294 332 IPR001841 -
Lele40g0944 342 PANTHER OS01G0917900 PROTEIN 8 342 - -
Lele40g0944 342 SUPERFAMILY RING/U-box 293 338 - -
Lele40g0944 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 342 IPR013083 -
Lele40g0944 342 MobiDBLite consensus disorder prediction 171 205 - -
Lele40g0944 342 CDD RING-HC 294 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0944 Lele-ChrLele40 19930964 19931992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0944 8 342 C3H Transcription Factor Family AT3G07120 35.792 3.61e-50 169