Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0938 ATGGCTGTTCCAAAAGTGGACAAAAAGATGCTTGAAGAACTTGAAGCAATGGGATTTCCAAAGACAAAGGCAACTCGAGCACTCCATTATTCTGGTTTGGATGCTAAAAGTTGTAATACTAATGTAGAGGATGCTATAAATTGGATTGTTGAGCATGAGAATGACACTGATATTGACGAGATTCTACTGGTAGATTCAGATATTGAGATTGATTCTTCTCAATCATTCCCTATTACAGAAGAAATGCGAATCAAAGCAGAGAAGCTATGGAAGATTGATTCTTCTCATGCATCCCCTATCACAGAAGAATTGCAAATCAAAGAACAGAAGCTAAGTAGGGAACAATTGCATAATATGAAAGAAGAGAAAGAAAAGAAATTGGAGATAGAAAGGGAAAAGGAGAGGATCCAAGCAGGTAAGAAACTCAATGAGATGAACCGAATTGCTGAAGAAAATGAAAGGCAACGACATATAACCTTGCGGAAAGCAGAGAAAGAAGAGGAGAAAAGAGCAAGGGAAAAAGTCATACAGAAACTAGAACAGGATAAGATAAATAGAAGGTCTAAACCTGAGTTGCCCATAGAGGGTCATAAAACCGTGAGATCTTCAGCTACAACAGTACAGAAAGAAAAGAATGAGCATGCAAGAGTGAGAAGGGCCTTCGAAACACTTTTAATTTATGTTGGGAATGTTGTCAAGCATCCCAACCAGGAAAAATACAGGAAGATCCGATTGAGCAACCCATTATTCCAGGATAGAGTTGGGAGTTTGAATGGAGGTGTGGAATTTCTTGAACTATGTGGGTTTGAGAGAATGGGTGAATTTTTGTATCTTCCTGAGGAAAAGGCGGACATAACGCTACTAAATTCAGCTGGATTTGTGATAAAGTCTGCTATTACAAATCCCTACTTTGGACTTCTTAGTACTCGAACATTGTTATAA 942 0.3832 MAVPKVDKKMLEELEAMGFPKTKATRALHYSGLDAKSCNTNVEDAINWIVEHENDTDIDEILLVDSDIEIDSSQSFPITEEMRIKAEKLWKIDSSHASPITEELQIKEQKLSREQLHNMKEEKEKKLEIEREKERIQAGKKLNEMNRIAEENERQRHITLRKAEKEEEKRAREKVIQKLEQDKINRRSKPELPIEGHKTVRSSATTVQKEKNEHARVRRAFETLLIYVGNVVKHPNQEKYRKIRLSNPLFQDRVGSLNGGVEFLELCGFERMGEFLYLPEEKADITLLNSAGFVIKSAITNPYFGLLSTRTLL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0938 313 PANTHER F13M7.16 PROTEIN 1 307 - -
Lele40g0938 313 Coils Coil 149 185 - -
Lele40g0938 313 CDD UBA_PUB_plant 6 59 - -
Lele40g0938 313 SMART PGNneu 219 280 - -
Lele40g0938 313 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 52 IPR015940 -
Lele40g0938 313 SUPERFAMILY PUG domain-like 206 303 IPR036339 -
Lele40g0938 313 Gene3D - 202 297 - -
Lele40g0938 313 SUPERFAMILY UBA-like 5 64 IPR009060 GO:0005515
Lele40g0938 313 Coils Coil 106 139 - -
Lele40g0938 313 Gene3D - 7 59 - -
Lele40g0938 313 Pfam PUB domain 216 284 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0938 Lele-ChrLele40 19899214 19902940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0938 1 307 C2H2 Transcription Factor Family AT1G04850 46.884 1.37e-72 225