Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0918 ATGAACTCGATGATGAAGGCAGCTACGATTTTCCTCTTCTTCCTTCTTATTTCGACCCATGCTTCTGCTAAGAAGGCCGCTGATGTAACAGAGTTACGGATTGGAGTGAAGCACAAACCAAAATCATGTGAAGTTCAGGCACATAAAGGTGATAGAGTCAAAGTGCATTATCGGGGAAAACTTACTGATGGAACTGTTTTTGATTCTAGCTTTGAAAGAGATAGCCCAATTGAATTTGAGCTTGGTACCGGACAAGTGATCAAAGGGTGGGACCAAGGATTATTGGGAATGTGTCTTGGTGAGAAGCGCAAGTTACAAATACCAGCAAAACTTGGCTATGGAGAGATGGGTTCCCCTCCGACTATTCCTGGTGGTGCAACACTCATTTTTGACACTGAACTCGTAGGAGTGAATGGGAAAACTTTAACTGAAGAAAAATCAGACTCTGAGCTTTAG 456 0.4276 MNSMMKAATIFLFFLLISTHASAKKAADVTELRIGVKHKPKSCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERDSPIEFELGTGQVIKGWDQGLLGMCLGEKRKLQIPAKLGYGEMGSPPTIPGGATLIFDTELVGVNGKTLTEEKSDSEL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0918 151 FunFam Peptidylprolyl isomerase 18 138 - -
Lele40g0918 151 SUPERFAMILY FKBP-like 38 143 - -
Lele40g0918 151 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 138 IPR001179 GO:0003755
Lele40g0918 151 Gene3D - 18 138 IPR046357 GO:0003755
Lele40g0918 151 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 135 IPR001179 GO:0003755
Lele40g0918 151 PANTHER PEPTIDYLPROLYL ISOMERASE 9 140 IPR044609 GO:0000413|GO:0003755|GO:0061077
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0918 Lele-ChrLele40 19748184 19751138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0918 51 151 Calmodulin-binding Proteins AT3G25230 32.075 3.39e-06 43.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1098 37 20670058 20673413 Lele40g0918 40 19748184 19751138 hybridization
Lele38g0977 38 21353677 21356701 Lele40g0918 40 19748184 19751138 hybridization