Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0917 ATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGTCAACCAGCAAACACTAAGCTGTCAAGTAACAAAACAGTCAGGAGAATTCGTGTAAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACAGGAAATTATTCATGGGGTAGTGAAGCTGTGACTCGTAAAACACGTATATTGGATGTGGTTTACAATGCCTCAAACAATGAACTTGTGCGAACACAAACCCTTGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCTCCCTTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGTAGGAAGAAGAAAGCAGCTGCCAAGAAGGATTCAGCAGAGGAGGGTGAAGCTGCTGCTGCTGTTGAAGAGACAAAGAAAAGTAATCATGTGCTTAGAAAACTAGAGAAGCGTCAGAAGGATCGAAAGCTGGATCCCCACATTGAAGAGCAATTTGGTGGTGGCCGATTGTTGGCTTGCATTTCTTCTCGACCTGGGCAATGTGGCAGAGCTGATGGCTACATATTGGAAGGCAAGGAGTTGGAGTTTTACATGAAGAAGCTCCAGAGGAAGAAGGGAAAGGGTGCTGGTGCTACTTGA 666 0.4625 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAAAKKDSAEEGEAAAAVEETKKSNHVLRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAT 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0917 221 CDD Ribosomal_S8e_like 5 198 - -
Lele40g0917 221 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lele40g0917 221 FunFam 40S ribosomal protein S8 32 162 - -
Lele40g0917 221 MobiDBLite consensus disorder prediction 11 26 - -
Lele40g0917 221 Gene3D - 32 162 - -
Lele40g0917 221 FunFam 40S ribosomal protein S8 163 216 - -
Lele40g0917 221 MobiDBLite consensus disorder prediction 1 41 - -
Lele40g0917 221 Pfam Ribosomal protein S8e 5 198 IPR022309 -
Lele40g0917 221 TIGRFAM eS8: ribosomal protein eS8 1 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lele40g0917 221 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Lele40g0917 221 Gene3D - 163 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0917 Lele-ChrLele40 19744524 19746596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0917 1 220 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.000 3.96e-127 356